Gene Information

Name : YSA_08975 (YSA_08975)
Accession : YP_006388734.1
Strain : Pseudomonas putida ND6
Genome accession: NC_017986
Putative virulence/resistance : Unknown
Product : major facilitator transporter
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4872148 - 4873461 bp
Length : 1314 bp
Strand : +
Note : -

DNA sequence :
ATGCCAATTGCGAATGCAACCACGGTCCACAGTGACATCGACCATGGCACGAAAGCGCTGTACAGCAAGATCACCTGGAG
GCTCATCCCCTTCTTGTGTTTCTGCTACCTCGCAGCTTATCTGGACCGCATCAATGTCGGCTTCGCCAAGCTGCAGATGC
TCGAAGACCTGCAGTTCAGCACAGCGGCCTATGGCCTGGGTGCAGGGCTGTTCTTCGTCGGCTACATCATCTTCGAAGTG
CCGAGTAACCTGATCCTGCAGCGCGTTGGCGCCAAGCTGTGGATCGCCCGCATCATGATCACCTGGGGCCTGCTGTCGGC
CTGCACCCTGTTCGTCACCAGCACCACCCAGTTCTATATCCTGCGTTTCCTGCTGGGTGCGGCCGAGGCCGGCTTCCTGC
CAGGCGTGTTGTACTACCTGACCATGTGGTACCCCACCTATCGCCGCGGGCGCATCATTGCCCTGTTCATGATCGGGCTG
CCGTTGTCGAGCGTGATTGGCGGGCCGATTTCTGGCTGGATCATGGGGCATTTCGACCAGGTTCAAGGTTTGCATGGGTG
GCAGTGGCTGTTCCTGCTGGAGGCGATCCCCAGCGTTTTGCTCGGCATCCTCACGTTCTGGGCATTGCCTAACCATTTTC
AGCAGGCCAAGTGGCTGTCGGCTGACGACAAGGCACAACTGGCGGCAGACCTGGCCGCCGACGATGCCGAGGGCAAGGAC
AGCAAACACAGCTTCCGCGATGGCTTCTTCAACCTTAAGGTGTGGATGCTCGGTGGTATCGACTTTTCGATCCTGCTCAG
CGCCTATGCGATGGGCTTCTGGATGCCGACCTTCATCCGCGATGCGGGCGTCAGCGACACCTTCCATATCGGCCTGCTCA
CGGCCATTCCAAGCCTGGCCGCGCTGGCCGGCATGCTCATGATCGGGGCCAGCTCCGACCGCCACCGCGAGCGCCGCTGG
CACATCATCGTGCCGTTCATCATTGGTGCAATCGCCATGGCCAGCAGCACCTTGTTCAGCCAGAACCTGGTGATGACCGT
GGTGCTGTTCGCCATTGCCTCGGCGGCGATCATCGGCGCGGTGCCGGTGTTCTTCAGCCTGCCGGCGACCTTCCTCAAAG
GCACCGCAGCCGCCACCGGCTTTGCCCTGGCCTGTTCGGTAGCCAACATCGCCGGCCTGGTGAGCAACTCACTGATGGGC
GTGGTCACCGACCTCACCGGCACCTCGCACGCTGCGCTGTGGGTGTTTGCCGGCTGCCTGATCCTCAGCTGCTTCCTGGT
CATCGCCTTGCCGGCCAAGCTGGTCAACCGCTAG

Protein sequence :
MPIANATTVHSDIDHGTKALYSKITWRLIPFLCFCYLAAYLDRINVGFAKLQMLEDLQFSTAAYGLGAGLFFVGYIIFEV
PSNLILQRVGAKLWIARIMITWGLLSACTLFVTSTTQFYILRFLLGAAEAGFLPGVLYYLTMWYPTYRRGRIIALFMIGL
PLSSVIGGPISGWIMGHFDQVQGLHGWQWLFLLEAIPSVLLGILTFWALPNHFQQAKWLSADDKAQLAADLAADDAEGKD
SKHSFRDGFFNLKVWMLGGIDFSILLSAYAMGFWMPTFIRDAGVSDTFHIGLLTAIPSLAALAGMLMIGASSDRHRERRW
HIIVPFIIGAIAMASSTLFSQNLVMTVVLFAIASAAIIGAVPVFFSLPATFLKGTAAATGFALACSVANIAGLVSNSLMG
VVTDLTGTSHAALWVFAGCLILSCFLVIALPAKLVNR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAT96099.1 major facilitator family transporter Not tested T-PAI Protein 4e-85 47
unnamed AAT96228.1 major facilitator family transporter Not tested T-PAI Protein 4e-85 47
unnamed AAT96176.1 major facilitator family transporter Not tested T-PAI Protein 3e-85 47
unnamed AAT96116.1 major facilitator family transporter Not tested T-PAI Protein 2e-87 47
unnamed AAT96055.1 major facilitator family transporter Not tested T-PAI Protein 4e-85 47