|
Name : YSA_08774 (YSA_08774) Accession : YP_006388635.1 Strain : Pseudomonas putida ND6 Genome accession: NC_017986 Putative virulence/resistance : Unknown Product : seryl-tRNA synthetase Function : - COG functional category : - COG ID : - EC number : - Position : 4786650 - 4787930 bp Length : 1281 bp Strand : + Note : - DNA sequence : ATGCTCGATTCCAAACTGTTACGCGGCCAACTTCAGGAAGTGGCGGATCGCCTGGCCTCCCGTGGCTTCAGCCTGGATGT CGCGCGCATCGAATCACTGGAAGAGCGCCGCAAGGCGGTGCAGACCCGCACCGAACAGCTGCAGGCTGAGCGTAACGCCC GTTCCAAGTCCATCGGCCAGGCCAAGGCCAAGGGTGAAGACATCGCCCCGCTGATGGCGGACGTCGAGCGCATGGCCAAC GAACTGGCCGCCGGCAAGGCTGAGCTGGACGCCATTCAGGCCGAGCTGGATGGCATCCTGCTGACCATCCCCAACCTGCC GGACGCCAGCGTGCCGGTCGGCGCCAGTGAAGACGACAACGTCGAAGTGCGCCGTTGGGGCACGCCGAAGGCGTTCGACT TCGAAATCAAGGACCATGTGGCCCTTGGTGAAATCAGCGGTGGCCTGGACTTCGAAGCGGCTGCCAAGCTGTCCGGCGCC CGTTTTGCTGTGCTGCGTGGTCCGGTTGCCCGTCTGCACCGCGCCCTGGCGCAGTTCATGATCAACCTGCACACCGGCGA ACATGGCTACGAGGAACACTACACCCCGTACATGGTGCAGGCGCCCGCGCTGCAGGGCACTGGCCAGTTGCCGAAGTTCG AGGAAGACCTGTTCAAGATCACCCGCGAAGGCGAGGCTGACTTCTACCTGATCCCGACCGCCGAAGTGTCGCTGACCAAC CTGGTGGCGGGTGAAATTCTCGACGCCAAGCAGCTGCCGCTCAAACTGGTTGCCCACACCCCTTGCTTCCGCAGCGAAGC CGGCGCTTCTGGTCGTGACACCCGCGGCATGATCCGCCAGCACCAGTTCGACAAAGTCGAGATGGTGCAGGTGGTAGAGC CGTCCAAGTCGATGGAAGCCCTGGAAGGCCTGACCGCCAACGCCGAGCGCGTGCTGCAGTTGCTTGAGTTGCCATACCGC GTGCTGGCCCTGTGCACTGGCGACATGGGCTTTGGTGCGGTGAAAACCTACGACCTGGAAGTGTGGGTGCCGAGCCAGGA CAAGTACCGCGAAATCAGCTCGTGCTCCAACTGTGGTGACTTCCAGGCGCGCCGCATGCAGGCTCGCTGGCGTAACCCGG AAACCGGCAAGCCAGAGCTGGTACACACGCTCAACGGCTCCGGTCTGGCCGTAGGCCGTACCCTGGTGGCTGTGCTGGAA AACTACCAGCAGGCCGACGGCTCAATCCTGGTGCCGGAAGTGCTGAAGCCTTACATGGGCGGCGTCGAGGTCATCCGCTA A Protein sequence : MLDSKLLRGQLQEVADRLASRGFSLDVARIESLEERRKAVQTRTEQLQAERNARSKSIGQAKAKGEDIAPLMADVERMAN ELAAGKAELDAIQAELDGILLTIPNLPDASVPVGASEDDNVEVRRWGTPKAFDFEIKDHVALGEISGGLDFEAAAKLSGA RFAVLRGPVARLHRALAQFMINLHTGEHGYEEHYTPYMVQAPALQGTGQLPKFEEDLFKITREGEADFYLIPTAEVSLTN LVAGEILDAKQLPLKLVAHTPCFRSEAGASGRDTRGMIRQHQFDKVEMVQVVEPSKSMEALEGLTANAERVLQLLELPYR VLALCTGDMGFGAVKTYDLEVWVPSQDKYREISSCSNCGDFQARRMQARWRNPETGKPELVHTLNGSGLAVGRTLVAVLE NYQQADGSILVPEVLKPYMGGVEVIR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 3e-108 | 55 |
