Gene Information

Name : YSA_00100 (YSA_00100)
Accession : YP_006383950.1
Strain : Pseudomonas putida ND6
Genome accession: NC_017986
Putative virulence/resistance : Unknown
Product : Short-chain dehydrogenase/reductase SDR
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 46812 - 47777 bp
Length : 966 bp
Strand : -
Note : -

DNA sequence :
ATGCCCGTCACCTGCCTCCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGAAGATCAAGATCAAGATCAAGATCAAAAG
CCAGATCAACAGCCAGATCAACAGCCAGATCAACAGCCACATCAACAGCAGAGGGTTGGCTGTGCTGATCTTCGTCATTC
CAACGCAGCGCCATTTCGCCTATTGTCGATGCTCCCTTCCCCAAACCATTGGCAAACCCATGGAGAACGTCATTGTCATC
ACCGGCGGCAGCCGCGGCATCGGCGCCGCCACTGCGCTGTTGGCCGCCCGCCAGGGCTACCGCATCTGCATCAACTATCA
CGCCGATGACCAAGCCGCCGAAGCCATCCTCAGCCAGGTCCGCGCCCTGGGCTCCGAGGCCATCGCGGTGCGCGCCGACG
TTAGCGTCGAAGATGAAATCATCCAGCTGTTCCTGCGCGTCGACGATGAGCTCGGCCCGATCACCGCACTGGTCAACAAC
GCCGGCACCATCGGCCAGCAAAGCAGGGTCGAGGACATGTCCGAGTTCCGTCTGCTGAACGTCATGAAGACCAACGTCGT
CGGCCCCATGCTCTGCGCCAAGCACGCCCTGCTGCGCATGGCGCGCCGGCATGGCGGGCAAGGCGGGGCCATCGTCAACG
TATCATCGGTCGCCGCACGCCTGGGTTCGCCCAACGAGTATGTCGACTATGCCGCCTCCAAGGGCGCGCTCGACACCTTC
ACCATCGGCCTGGCCAAAGAAGTGGCAGGCGAGGGCGTACGCGTCAATGGCGTACGACCAGGCTATATCCATACCGGTTT
CCATGCGCTTTCGGGTGACCCGGATCGCGTCAGCAAGCTTGAACCTGGCTTGCCCATGGGCCGAGGAGGGTATCCCGAGG
AAGTGGCCGAGGCCATCCTCTGGTTGCTCTCGGACAAAGCCTCCTATGCCACCGGCAGTTTCATCGACCTGGGCGGCGGG
CGCTGA

Protein sequence :
MPVTCLRKACVRPPEVAKIKIKIKIKSQINSQINSQINSHINSRGLAVLIFVIPTQRHFAYCRCSLPQTIGKPMENVIVI
TGGSRGIGAATALLAARQGYRICINYHADDQAAEAILSQVRALGSEAIAVRADVSVEDEIIQLFLRVDDELGPITALVNN
AGTIGQQSRVEDMSEFRLLNVMKTNVVGPMLCAKHALLRMARRHGGQGGAIVNVSSVAARLGSPNEYVDYAASKGALDTF
TIGLAKEVAGEGVRVNGVRPGYIHTGFHALSGDPDRVSKLEPGLPMGRGGYPEEVAEAILWLLSDKASYATGSFIDLGGG
R

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VSAL_I1482 YP_002262921.1 glucose 1-dehydrogenase Not tested Not named Protein 2e-60 57
orf29 AAO17195.1 Orf29 Not tested tcd island Protein 8e-65 56