|
Name : YSA_08532 (YSA_08532) Accession : YP_006388495.1 Strain : Pseudomonas putida ND6 Genome accession: NC_017986 Putative virulence/resistance : Unknown Product : potassium-transporting ATPase B Function : - COG functional category : - COG ID : - EC number : - Position : 4636286 - 4638340 bp Length : 2055 bp Strand : + Note : - DNA sequence : ATGAACATGCCCATTCCTGAAGTGAATAGCCGGCACAATGCCAAGGACCAGACCCGCTTCGCCGCGCTGTGGCGCCCGGC GCTGGTGCAGGCGTTCGTCAAGCTCGACCCGCGTCAGCTCAAGCGCTCCCCGGTAATGCTGGTGGTGGCCCTGACCGCGG TGCTGACCACCGTGCTGTGTTTCGCCCCCGGCGGCGGCGTGAGCACCGGTGTTGCGGTGCAGATTGCCCTGTGGCTGTGG TTCACCGTGTTGTTCGCCAACTTCGCCGAGGCGTTGGCCGAAGGCCGTGGCAAGGCCCGCGCCGACAGCCTCAAGGCCGG CAGCCAGGGCCTGACCGCCCAGCGTCGTCTGCGTGATGGCAGCTACGAGACGGTAGCTGCCAGCGCGCTGCGCAAGGACG ATTTGGTACGCGTGGTCGCCGGCGAAATGATCCCCGGCGACGGCGAGGTGATTGAAGGCATTGCGGCCGTCAACGAGGCC GCCATTACCGGCGAGTCCGCGCCGGTCATACGCGAATCAGGTGGCGACCGCTCGGCGGTGACCGGCAATACGCGGCTGGT CTCCGACTGGCTGCTTGTCCGCATCACCAGCAACCCGGGCGAGTCGACCCTGGACCGCATGATCGCCCTGGTTGAAGGGG CCAAGCGGCAGAAGACCCCGAACGAAATCGCCCTCGACATCCTGCTGATCGGCCTGACCCTGATTTTCCTGATCGTGGTG GTGACCTTGCAGCCGTTCGCCCACTTCGTGGGTGGCAGCCTGCCGCTGATCTTCCTGGCCGCGCTGCTGGTGACACTGAT CCCGACCACCATCGGCGGCCTGCTGTCGGCCATCGGTATCGCCGGCATGGACAGGCTGGTACGGCTGAATGTCATTGCCC GCTCGGGCCGCGCCGTCGAGGCGGCCGGGGACGTGCATACGCTGATGCTCGACAAGACCGGCACCATCACCTTCGGTAAC CGCCGCTGCAGCGCACTGCATGCTGCACCGGGCATTACCGCCAAGGAACTGGGGGAGGGCGCCTTGCTGGCGTCGCTGGC CGACGACACCGCTGAAGGCAAATCGATTGTCGAATACCTGCGCCAGTTGCACGACTTTGTCGACCCGCCTGCCGGGCAGT TCGAAGCGGTGGCGTTCAGTGCCGAGACACGCCTGTCGGGCATCGACTTCCAGCAGCACCGCTACCGCAAGGGCGCCGTC GATGCGGTGCTGGCCTTCGTCGGTATGCAACGCCTGGAAATGCCGGCGGCGCTGGCCCGTGAAGTCGAACGCATCGCGCA GAGTGGTGGCACCCCGTTGCTGGTGTGCGTCGACAAGCGCTTGCTGGGTGTGATCCACCTCAAGGACGTGGTCAAGCCTG GCATCCGCGAGCGCTTCGCCGAGCTGCGCAAGCTGGGCATCCGCACGGTGATGGTAACCGGCGACAACCCGTTGACTGCG GCCGCCATCGCCGCCGAAGCGGGGGTAGATGACGTGCTGGCCGAGGCCACGCCCGAGAAGAAGCTGGCGCGTATTCGCCA GGAGCAGAATGACGGCCGCCTGGTTGCCATGTGTGGCGACGGTGCCAACGACGCCCCGGCACTGGCCCAGGCTGACGTAG GCATGGCCATGAACGACGGCACTCAGGCTGCGCGGGAGGCCGCCAACATGGTCGACCTGGACAGCGACCCGACCAAGCTG CTGGACGTAGTCCAGGTCGGCAAGGAGCTGCTGGTCACCCGCGGTGCGTTGACAACGTTCTCCATTGCCAACGACGTGGC CAAATACTTCGCCATCCTGCCGGCGCTGTTCGCTGCCATCTACCCGCAACTGGGTGTGCTCAACCTGATGCAACTGGCCA GCCCGCAGAGCGCCATCCTGTCGGCGATCGTGTTCAACGCGCTGATCATCATCGTGCTGATCCCGCTGGCGCTGCGTGGG GTGCGCGTACAGGCGGCCAGTGCGGCGCACCTGTTGCGGCGCAACCTGCTGATCTACGGGCTGGGTGGCATTGTGGTGCC GTTTGCCGGGATCAAGCTGATCGACCTGCTGCTCAACGCCCTGAACCTGGTCTGA Protein sequence : MNMPIPEVNSRHNAKDQTRFAALWRPALVQAFVKLDPRQLKRSPVMLVVALTAVLTTVLCFAPGGGVSTGVAVQIALWLW FTVLFANFAEALAEGRGKARADSLKAGSQGLTAQRRLRDGSYETVAASALRKDDLVRVVAGEMIPGDGEVIEGIAAVNEA AITGESAPVIRESGGDRSAVTGNTRLVSDWLLVRITSNPGESTLDRMIALVEGAKRQKTPNEIALDILLIGLTLIFLIVV VTLQPFAHFVGGSLPLIFLAALLVTLIPTTIGGLLSAIGIAGMDRLVRLNVIARSGRAVEAAGDVHTLMLDKTGTITFGN RRCSALHAAPGITAKELGEGALLASLADDTAEGKSIVEYLRQLHDFVDPPAGQFEAVAFSAETRLSGIDFQQHRYRKGAV DAVLAFVGMQRLEMPAALAREVERIAQSGGTPLLVCVDKRLLGVIHLKDVVKPGIRERFAELRKLGIRTVMVTGDNPLTA AAIAAEAGVDDVLAEATPEKKLARIRQEQNDGRLVAMCGDGANDAPALAQADVGMAMNDGTQAAREAANMVDLDSDPTKL LDVVQVGKELLVTRGALTTFSIANDVAKYFAILPALFAAIYPQLGVLNLMQLASPQSAILSAIVFNALIIIVLIPLALRG VRVQAASAAHLLRRNLLIYGLGGIVVPFAGIKLIDLLLNALNLV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ef0088 | AAM75291.1 | EF0088 | Not tested | Not named | Protein | 3e-143 | 59 |
| kdpB | NP_814334.1 | potassium-transporting ATPase subunit B | Not tested | Not named | Protein | 4e-143 | 59 |
| kdpB | BAA82181.1 | potassium-transporting ATPase(B chanin) | Not tested | Type-II SCCmec | Protein | 1e-119 | 57 |
| kdpB | YP_251949.1 | potassium-transporting ATPase subunit B | Not tested | SCCmec | Protein | 2e-119 | 57 |
| SAR0071 | YP_039539.1 | potassium-transporting ATPase subunit B | Not tested | Type-II SCCmec | Protein | 2e-119 | 57 |
| kdpB(SCCmec) | NP_370597.1 | potassium-transporting ATPase subunit B | Not tested | Type-II SCCmec | Protein | 2e-119 | 57 |
| kdpB | NP_373310.1 | potassium-transporting ATPase subunit B | Not tested | Type-II SCCmec | Protein | 2e-119 | 57 |
| kdpB | YP_190029.1 | potassium-transporting ATPase subunit B | Not tested | Type-II SCCmec | Protein | 2e-119 | 57 |
