|
Name : YSA_00824 (YSA_00824) Accession : YP_006384340.1 Strain : Pseudomonas putida ND6 Genome accession: NC_017986 Putative virulence/resistance : Unknown Product : relaxase Function : - COG functional category : - COG ID : - EC number : - Position : 416941 - 418668 bp Length : 1728 bp Strand : + Note : - DNA sequence : ATGAAGCGTTGGTGGTTCAAACATCAAAAAGGCAATGGCGCGGAGCCCACGCTCGCTCCGGCTCCCGAGGGATTTCTCCT CCCACTCGCCTCTGAATCCCTGCTCGGTGCCGACCACCGGAAAAAGCTGTTGGAGCGCATCTGGCAATACACGGCGCTCT CCGAGCCGCAGTTCAATCAGCTCTACCTTGACCCGATCCGCCGCTACGCCGCCTATGTACAGCAACTCCCTGCCAGCGAA AGTCACCACCATGCCTATCCGGGCGGCATGCTGGACCATGGACTAGAACTGGTTGCCTGCAGCCTGAAGCTGCGCCAGTC ATACCTGTTGCCCAGCGGCGCCGCACCGGAAGACCAGGCTGCGCAGGCCGACGCCTGGAGCGCGGCGATTGCCTACGGCG CCCTACTCCACGATATTGGCAAGATTGCCGTCGACTTGCTGGTTGAATACCAGAATGGCGAAGTGTGGCACCCCTGGCAC GGCCCTTTGAACCAGGCCTACCGCTTTCGCTACCTGGCCGGCCGCGACTACAAGCTGCACGGCGCTGCCACCGGGTTGCT GTACACCCAGATTTTGACGTCACTCCAACTCGACTGGCTCAGCAGCTTCCCGGTCCTGTGGGGCCACCTGTTGTACCTAC TGTCCAACCATTACGAGCATGCCGGCACCCTCGGCGAATTGGTGCTGCAAGCGGACCGGGTATCCACCGCGCAGAACATT GGTGCCAACCCCACCAAGGCTCTGCAGGCACCCAAACACTCGTTGCAGCACCATCTGCTCATGGGTCTACGTCATCTGGT CAAGAACGAGTTCAAGCTCAACCAGCCCGGTGCCGCCGGTTGGCTCACCGAAGATCACCTCTGGTTGGTCAGCAAGACCG CCACCGACAAATTGCGCGCTTACCTGCTGGCTCAGTCGGTCGACGGCATCCCCTCCTCCAACATCGCCCTATTCGATGAA CTGCAATCACATGGATTGGTGGATGCGACACCGGAGGGCAAAGCGGTATGGAGCGCCACCGTCGCAGACAATGACTGGCA ACAACGCTTTACCTTTCTCCGCCTGCAGCCAAACCTGGTGTGGGCAGATGAGCCCCGACCAGATTACTTTAGTGGCACGG TGGAGCCGATGACGGTCAATCCCCTGTTGTCGAGTGCATGCAGCGAATCGAGCACAGATAGACCGCAACCTGCCGCGGAT GCGACGCAGCCGGCCGCCGCTCCCCAGACTGAGGATTTCGATTACCTAGACGAACTGATGGATATGTTGGAAGAGCCACG TCAGCTGCAGACTGAATCAAGCACAGGAAGCCTGCAGCCTGCCACTACGCTTTCCTGGGATGTCGTGGGGCTGGACTTCC TTGAGTGGTTGCGCAAAGGAGTTCTCAGTCATCGGTTAGTGATCAACGACAGCAAGGCCAAGGTCCACACCGTGGAAGGC ACTTTTTTCCTGGTCACACCGGGCATTTTCCAACGATACGCAGCCGAGCATCCGATGTTGGTCGATGCAGATTTTCAGAA TAACGCCTGGCGACGCCTCCAACGCCAATTTGAGAGGCTAGATGTTCATGTGAGAAAACCCAATGGCCAGAACATTTGGA CTTGCAGCGTACGAGGCCCGCGGAAAACCACGTACCTCAATGGCTACATCCTGCGTGACACCAATCTTCTAGGCTTGCCG CCTCCTCCAGACAACCCGTTCCTTTCTCTCCGACCTCCGACACCCTAA Protein sequence : MKRWWFKHQKGNGAEPTLAPAPEGFLLPLASESLLGADHRKKLLERIWQYTALSEPQFNQLYLDPIRRYAAYVQQLPASE SHHHAYPGGMLDHGLELVACSLKLRQSYLLPSGAAPEDQAAQADAWSAAIAYGALLHDIGKIAVDLLVEYQNGEVWHPWH GPLNQAYRFRYLAGRDYKLHGAATGLLYTQILTSLQLDWLSSFPVLWGHLLYLLSNHYEHAGTLGELVLQADRVSTAQNI GANPTKALQAPKHSLQHHLLMGLRHLVKNEFKLNQPGAAGWLTEDHLWLVSKTATDKLRAYLLAQSVDGIPSSNIALFDE LQSHGLVDATPEGKAVWSATVADNDWQQRFTFLRLQPNLVWADEPRPDYFSGTVEPMTVNPLLSSACSESSTDRPQPAAD ATQPAAAPQTEDFDYLDELMDMLEEPRQLQTESSTGSLQPATTLSWDVVGLDFLEWLRKGVLSHRLVINDSKAKVHTVEG TFFLVTPGIFQRYAAEHPMLVDADFQNNAWRRLQRQFERLDVHVRKPNGQNIWTCSVRGPRKTTYLNGYILRDTNLLGLP PPPDNPFLSLRPPTP |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ORF SG44 | AAN62266.1 | conserved hypothetical protein | Not tested | PAGI-3(SG) | Protein | 2e-129 | 52 |
| pph99 | CAI36140.1 | predicted HD-superfamily hydrolase | Not tested | PPHGI-1 | Protein | 5e-111 | 46 |
