Gene Information

Name : YSA_00804 (YSA_00804)
Accession : YP_006384330.1
Strain : Pseudomonas putida ND6
Genome accession: NC_017986
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 409899 - 411257 bp
Length : 1359 bp
Strand : +
Note : -

DNA sequence :
ATGATGAACAATCTCGCGCTCGGACTGGTGTGCTTCCTCATGTGTGCCGCAGGCCATGCCGCAGAGAATGGCTACCACCT
CGGTGACCAGGCCCCGGTCCTGGATGACCGCGTGATGTACACCATCGGTGGCGGTTCTGCAGCCGGTGCGCCCTCCTCGC
TCTACCGCCCCAATGGCCTCGGGGTCGGTATGTCCTGGCGGGCCAACATGATGTGCGGAAACATGAACCTCTCGAACACC
CTGCAGAACCAGCTCAATGGCGCCACCCAGGGCTTCCAGCAGATCATGGGCAATGTCATCCAGAACGCCACACAGGCGGT
CATGTCGCTGCCGGCGATGATCATCCAGCGCGCCAACCCCGGGCTGTATGAGCTGCTGAGCAATGGCGTGCTGCAGGGGC
GCATCGACTTCGACCGTTCCAAACTCACTTGCCAGGCGATGGCGGCGAAAATGGCCGATAAGGTCGACCAGGCCGGCTGG
GGCGCGCTGGCCCAGAATCAGGAAATGCAGCACAACCTCGAGCAGTCTGGCGGCGATGCCGTAATGGCGGTGAAGGATAC
CGAGTCGAACAACGGCAACAACGGCGTCAGCTGGGTAGGCGGGCAGAAAGCCGGTGGCAACGGCCAGCAACCCATCCGGG
TGACTTCGGATGTGGTCAAGGCCGGCTACAACCTGCTGCACAGCAGATCCGTCGAGGACGCCTCCGCCCTCGGTTCGGCT
TGCCAGAATGGCGCTATCTGCCAGGCCTGGTCGAGTCCCGACGAAGCCTCGGAATGGGCGACACGGGTGCTCGGTGAAAC
TGAGGTGGAGACCTGCGACGACTGCGAGACGCTGCGCGTAACCGCCGGTACGGGCTTGTCACCGCTGATCCAGGAAACCT
ACACGGAACATCTGGAAGGCCTGCAGCGCATGGTCTCGGACGTCGACCAGCCTACCCCAGAGAACCTCAGCAAGGTCTCC
AGCCCCTTGTTGCAGGTTTCCCGCGGCGTCATCGAGGGGCTGCGCGATGACCCCGACCAGAACTTGCTGGCCCGGCGCCT
GGCCAGTGAGACCGCGCTGTCCAGCGTGATCTACAAGGCGATGCTGCTGCAGCGCACGCTGTTCGCCGGCAGCCACGAGC
CCAATGTCGCCTCGGCACAACCCGCTACCAATGCCCTGACTAGCAATGTCGAAACCCTGGAACGCGAGATTCGCCTGCTA
CAAACCGAGCTGCAAGTACGCCAGTCGCTGGCCACCAATACCGCCAGCCTGGTCCTCGATCGTCACGCCGGCGGTGCTGA
CGCGTCGCGGAACATCGATCAACGCGACCCGGAGCCGGACCGACTGCGCCGGGCTGAACAGCAGAGGAGCACGCCATGA

Protein sequence :
MMNNLALGLVCFLMCAAGHAAENGYHLGDQAPVLDDRVMYTIGGGSAAGAPSSLYRPNGLGVGMSWRANMMCGNMNLSNT
LQNQLNGATQGFQQIMGNVIQNATQAVMSLPAMIIQRANPGLYELLSNGVLQGRIDFDRSKLTCQAMAAKMADKVDQAGW
GALAQNQEMQHNLEQSGGDAVMAVKDTESNNGNNGVSWVGGQKAGGNGQQPIRVTSDVVKAGYNLLHSRSVEDASALGSA
CQNGAICQAWSSPDEASEWATRVLGETEVETCDDCETLRVTAGTGLSPLIQETYTEHLEGLQRMVSDVDQPTPENLSKVS
SPLLQVSRGVIEGLRDDPDQNLLARRLASETALSSVIYKAMLLQRTLFAGSHEPNVASAQPATNALTSNVETLEREIRLL
QTELQVRQSLATNTASLVLDRHAGGADASRNIDQRDPEPDRLRRAEQQRSTP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ORF C42 AAN62135.1 hypothetical protein Not tested PAGI-2(C) Protein 5e-91 53
RL016 AAP84143.1 putative pathogenesis-related protein Not tested PAPI-1 Protein 4e-92 53
EXA19 ABD94628.1 conserved hypothetical protein Not tested ExoU island A Protein 2e-92 53
unnamed ABR13356.1 hypothetical protein Not tested PAGI-5 Protein 4e-90 53
ORF SG50 AAN62272.1 hypothetical protein Not tested PAGI-3(SG) Protein 3e-89 52
pph90 CAI36131.1 hypothetical protein Not tested PPHGI-1 Protein 1e-89 50
YE3466 YP_001007627.1 hypothetical protein Not tested YAPI Protein 4e-55 41
api55 CAF28529.1 putative exported protein Not tested YAPI Protein 3e-55 41