Gene Information

Name : YSA_00802 (YSA_00802)
Accession : YP_006384329.1
Strain : Pseudomonas putida ND6
Genome accession: NC_017986
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 408925 - 409902 bp
Length : 978 bp
Strand : +
Note : -

DNA sequence :
ATGAACGTCACCGCCTTCCCCCTTAGCAAAGCGCCAAAACCCAGAACGGCTCGCCATGGCCGTGCCTTCACTACGGCAGC
TCTGCTGGTCGCCGCCGAACAGTGTCTCGCATTGACCACGCCTACCCTTGTCGCTTCCGTCACTTCGCTGCAGTGCCTGG
AGTATCGGGTCGTTGGGATCTGCTACTGGCTGCTTTGCACACCGTTCGGCTGCACAGTGCGAACCTCACCGAAAATCCGC
CATTTCATTCCCGAATTGGTCGTATCGAGCTATGCCGACACCGGCGCCAATCCCTGGAGCGAGATGTCGACGCTGTCGAT
GCCGACGCCAGGGTCGCAAGGGGGTGGCAACCTGATCACGCCTTCGCCGCAGCGCGATAACCTGCCACGGTTCAAGAATG
TCGACGGCATCGGGCATCCCGGTGGTGCAGCCCTCACGGCCCTGGCGCTCACGTTCGGCTATGCGTGCCCAAGCGGAGCG
GTGCCGTTTGCGCCCTACTACCTCAGCACACTCGACCCACTGGCTTGGCGCCAGGCCGTTCCCGAGTCCGTCTACCCACA
GGCACGGGTCCCGGGGATGCGCGAGATCGGCAACCAGGCACTCGGGGACATGTGGGGCAACGTGTATCCGCGACACGGTT
TTCTGGTGCAGCCCGACGATTTCAAGGCGGCTGCCGTGATGGCCCAACGCGCCAGCGACTTCATCACCCGCGTCGGCCAG
CCGCACGTTTATCTACCGCTGCAACCGATGCCGGCCCCCGGCTACTGGCCGCCGCAGCCGGTGATGGAGAACAACCTCAA
CAACCACCGCTGGCAGTTACTCACCCCGGTGATTCAGAACACCTGCGCCATCTTCCCCAGCCCAACGATCCAGAGCGCCG
ACGGCGCCTATGCCTGGTCGCTGTGGCGGCCCTACCGCTGCTGCCAGCGTATGGGGCAGACGTTTCTGTTCAGCATCGAC
TTTGATGGAGGCCAATGA

Protein sequence :
MNVTAFPLSKAPKPRTARHGRAFTTAALLVAAEQCLALTTPTLVASVTSLQCLEYRVVGICYWLLCTPFGCTVRTSPKIR
HFIPELVVSSYADTGANPWSEMSTLSMPTPGSQGGGNLITPSPQRDNLPRFKNVDGIGHPGGAALTALALTFGYACPSGA
VPFAPYYLSTLDPLAWRQAVPESVYPQARVPGMREIGNQALGDMWGNVYPRHGFLVQPDDFKAAAVMAQRASDFITRVGQ
PHVYLPLQPMPAPGYWPPQPVMENNLNNHRWQLLTPVIQNTCAIFPSPTIQSADGAYAWSLWRPYRCCQRMGQTFLFSID
FDGGQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
pph89 CAI36130.1 hypothetical protein Not tested PPHGI-1 Protein 4e-87 59
EXA20 ABD94629.1 conserved hypothetical protein Not tested ExoU island A Protein 2e-82 56
unnamed ABR13357.1 hypothetical protein Not tested PAGI-5 Protein 2e-82 56
RL017 AAP84144.1 conserved hypothetical protein Not tested PAPI-1 Protein 1e-81 56
ORF SG51 AAN62273.1 hypothetical protein Not tested PAGI-3(SG) Protein 2e-81 54
ORF C43 AAN62136.1 hypothetical protein Not tested PAGI-2(C) Protein 1e-80 53
YpsIP31758_3701 YP_001402655.1 hypothetical protein Not tested YAPI Protein 8e-74 50
api54 CAF28528.1 conserved hypothetical protein Not tested YAPI Protein 3e-73 50
Pmu_02990 YP_005176198.1 integrating conjugative element protein, PFL family Not tested ICEPmu1 Protein 8e-67 50
STY4576 NP_458661.1 hypothetical protein Not tested SPI-7 Protein 5e-77 49
t4273 NP_807871.1 hypothetical protein Not tested SPI-7 Protein 5e-77 49
PMI2573 YP_002152292.1 hypothetical protein Not tested Not named Protein 8e-65 49
YE3467 YP_001007628.1 hypothetical protein Not tested YAPI Protein 7e-68 48
unnamed AAX39458.1 unknown Not tested Hrp PAI Protein 3e-57 47