Gene Information

Name : YSA_00793 (YSA_00793)
Accession : YP_006384324.1
Strain : Pseudomonas putida ND6
Genome accession: NC_017986
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 403277 - 404083 bp
Length : 807 bp
Strand : +
Note : -

DNA sequence :
ATGATGCGTGTCTTGATCATGATGTTGGCGGTAGCCGCAGGCTGGTGTTCTGCAGTCGGTGCGGTCGAGGTCAAATACTG
GGACCGCTTGCCGCTGGCCGTTCCACTTACGGTGGACCAGGAGCGAGTCCTGATGCTGGATGAGGATGTTCGCGTGGGGG
TGCCGGGCACGATCGCCGGCAAGCTGCGTGTGCAGTCCGTCGGCGGCACCGTGTATCTGCGAGCCGCGGAAGCCCTTCCC
CCTACCCGGCTGCAACTGCAGTCGGTGAAGTCAGGCGACATCATCCTGATCGACATAGAGGCACTAGAGGGCAGCGAGGT
GCTGGAGCCGGTCAAGATCGTGGCCCAGGCTCCGGCATCGGACGTGGACGCTGCGAAGGAGGCGAAACCTGAAACGACGC
CGGTACAGGTAGTACTCACCCGCTATGCGGCGCAGAACCTCTATGCGCCCCTGCGTACAGTGGCACCACTGCCCGGTGTG
CGACGGGTGCCGCTGAGCGACTCCGTTGCGTTTAGCTCGTTGCTGCCCACCGAACGAGTTTCGATCAAGGCACTCGCCGC
CTGGCGGCTGGGCGATTACTGGGTGACTGCGGTGAAGATCGTGAATCGCGGTCCCGGCAAGGTAGTACTGGACCCGCGCC
ATCTGCAGGCCACGCTGTTCGCCGCAACATTCCAGCACTCGGACTTAGGTATCACCGGTACGCCTGAAGATACCACCGTG
GCGTATCTCGTCACCCGTGGTGGTGACCTGAAGCACGCGCTGCTGTTGCCACCACCGACGCCGGAGGCTGCCGATCATGA
AAGCTAA

Protein sequence :
MMRVLIMMLAVAAGWCSAVGAVEVKYWDRLPLAVPLTVDQERVLMLDEDVRVGVPGTIAGKLRVQSVGGTVYLRAAEALP
PTRLQLQSVKSGDIILIDIEALEGSEVLEPVKIVAQAPASDVDAAKEAKPETTPVQVVLTRYAAQNLYAPLRTVAPLPGV
RRVPLSDSVAFSSLLPTERVSIKALAAWRLGDYWVTAVKIVNRGPGKVVLDPRHLQATLFAATFQHSDLGITGTPEDTTV
AYLVTRGGDLKHALLLPPPTPEAADHES

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ORF C50 AAN62144.1 hypothetical protein Not tested PAGI-2(C) Protein 6e-54 53
ORF SG60 AAN62282.1 hypothetical protein Not tested PAGI-3(SG) Protein 4e-48 52
EXA36 ABD94645.1 conserved hypothetical protein Not tested ExoU island A Protein 1e-49 50
RL025 AAP84152.1 conserved hypothetical protein Not tested PAPI-1 Protein 3e-49 49
unnamed ABR13365.1 hypothetical protein Not tested PAGI-5 Protein 1e-49 49
pph81 CAI36122.1 hypothetical protein Not tested PPHGI-1 Protein 9e-54 47
YpsIP31758_3708 YP_001402662.1 hypothetical protein Not tested YAPI Protein 7e-48 47
api36 CAF28510.1 hypothetical protein Not tested YAPI Protein 6e-48 46
t4266 NP_807864.1 hypothetical protein Not tested SPI-7 Protein 5e-48 46
STY4569 NP_458654.1 hypothetical protein Not tested SPI-7 Protein 5e-48 46
YE3485 YP_001007644.1 hypothetical protein Not tested YAPI Protein 2e-47 46
PMI2580 YP_002152299.1 hypothetical protein Not tested Not named Protein 5e-49 46
Pmu_03100 YP_005176209.1 integrating conjugative element protein, PFL family Not tested ICEPmu1 Protein 1e-45 41