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Name : YSA_00753 (YSA_00753) Accession : YP_006384301.1 Strain : Pseudomonas putida ND6 Genome accession: NC_017986 Putative virulence/resistance : Unknown Product : DNA topoisomerase III Function : - COG functional category : - COG ID : - EC number : - Position : 386807 - 388774 bp Length : 1968 bp Strand : + Note : - DNA sequence : ATGCGCCTGTTCATCTGCGAGAAACCATCCCAAGCCCGCGACATCGCCCGGGTGCTGCAGGCCAGCCGACGCGGTGATGG CTACCTGGAGGGGCAGAACCTCACCGTCACCTGGTGCGTCGGCCATCTGCTGGAAACCGCACCGCCTGAAACCTATGGCG ATTACAAGCGCTGGTCGCTGGACGACTTGCCGATCATTCCCAGTCAATGGAAATTGGTGTCCAAGCCCAAGGTCGCTGGA CAGCTCAACGCGATTAGCCAACTGCTGCGCACCTGCAGCGAAGTGGTGATCGCCACCGACGCCGACCGCGAAGGCGAGAT GATCGCCCGGGAGATCCTTGAGCGCTGCCAGTACCATGGGCCGATTTTGCGCCTATGGCTGTCCGCACTGGATGAAGCGT CGATCCGACGGGCCTTGAGCGCCTTGCGACCAGGAGAGCAGACCTTGTCGCTGTACCACTGTGCCCTCGCTCGCTCCCGT GCCGACTGGCTGGTCGGCATCAACCTGAGCCGGCTGTTCACGCTGCTCGGCCGCCGCGCCGGTTTCGATGGACTGCTGCC GGTGGGACGCGTACAGACGCCCACCCTGCGCTTGGTGGTCGAGCGCGACCGGGCGATCGCCAGCTTTGTGCCGCAGCCGT TCTGGACCGTCGATGCACACCTGGAGCAGGACGGGATCCGTTTTCACGCGCGCTGGCAGGCCCCGACTGCGGTCAGCGAT GCGGTTGGACGCTGTATCGACGAAACCGCCGCGCAGCAGGCGCTCAGGCGCCTCACTCAAGCTGGCACCGCGCAGATCGA CAGCGTCGAGGTCGAGCGGGGGCGCGAAGGCCCCCCGCTGCCGTTCGACCTGGGCACGTTGCAGGAGATCTGCTCGGCCA AGCTCGGACTGGGTGCACAGGAGACCTTGGCCACCGCCCAGGCCCTGTATGAGACCCACAAGGCAACGACCTACCCGAGG ACGGATTGCGGCTACTTGCCGGAGAGTATGCTCGATGAGGTGCCGCGCGTGCTTCACGCCCTGGCCGCAGCCGCACCCTC GCTGGGGGCAGTGCTCAAGGAAATCGACCCCAGCCGCCGCTCACGCGCCTGGAACAGCAGCAAGATCACCGCGCACCACG GCATCATTCCCACCGCCGTCACCCTGGATTTGGCGCAGCTCTCCGAGCGCGAGCGGGCGGTTTACACGCTGATTCGCGCC CGCTACCTCGCGCAGCTCATGCCCGAGCACGAGTACCTGAAAACCCAGGCGCTGCTGCACAGCCAGGCAGACCAACTGGT GGCCCGTGGCAAGCAGGTCCTGGTTCGCGGCTGGAAGGCGGTGATCAACGAGGCCGACGGCGCAGAGCCGGCCGAACAGG CGCAGCGCTTGCCGACGTTGCGTGAATCCGCGACTGTGCTGCTGATCGACGCCACGCTCAACGCACAGCAGACGCAGCCA CCCAAGGCCTACACCGAAGGGACATTGGTCAAAGCCATGAAAACCATCGCCAGTCAGGTGGCCGAACCGCGGCTCAAGCA GAAGCTCAAGGACAGTTGCGGGCTCGGTACCGAGGCCACCCGCGCGGCCATCATCCAAGGCCTGATCGATCACGGTTACC TGACCAAGAAGAAACGCAGTCTGGCTGCCTCAGCCGCCGCGCATACCTTGATCGAAGCGGTGCCGCCAGAGGTGGCCGAC CCGGTCATGACCGCGTTGTGGGAGCAGGCGCTGGATCGCATCGAATCGGGCCAGCTGAGCGTAGAAACCTTTCTCGCCAA GCAGGCAGAATGGCTGACCCGACTGGTTCGCAGTAACGCCACGCTCACCCTGCGCCCGCCCCCCAGCAAGGGGCCCTTCT GCCCGGTGTGCCGCAGCACCATGCGCCAGCGCAAAGGTCGAACTGGAAATTTCTGGTCGTGCATCCGCTACCCCGAGTGC AAGGGCACCAAACCGGGGGCGAAAGCCAAGCGGGCGAAAAAAGCATGA Protein sequence : MRLFICEKPSQARDIARVLQASRRGDGYLEGQNLTVTWCVGHLLETAPPETYGDYKRWSLDDLPIIPSQWKLVSKPKVAG QLNAISQLLRTCSEVVIATDADREGEMIAREILERCQYHGPILRLWLSALDEASIRRALSALRPGEQTLSLYHCALARSR ADWLVGINLSRLFTLLGRRAGFDGLLPVGRVQTPTLRLVVERDRAIASFVPQPFWTVDAHLEQDGIRFHARWQAPTAVSD AVGRCIDETAAQQALRRLTQAGTAQIDSVEVERGREGPPLPFDLGTLQEICSAKLGLGAQETLATAQALYETHKATTYPR TDCGYLPESMLDEVPRVLHALAAAAPSLGAVLKEIDPSRRSRAWNSSKITAHHGIIPTAVTLDLAQLSERERAVYTLIRA RYLAQLMPEHEYLKTQALLHSQADQLVARGKQVLVRGWKAVINEADGAEPAEQAQRLPTLRESATVLLIDATLNAQQTQP PKAYTEGTLVKAMKTIASQVAEPRLKQKLKDSCGLGTEATRAAIIQGLIDHGYLTKKKRSLAASAAAHTLIEAVPPEVAD PVMTALWEQALDRIESGQLSVETFLAKQAEWLTRLVRSNATLTLRPPPSKGPFCPVCRSTMRQRKGRTGNFWSCIRYPEC KGTKPGAKAKRAKKA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| topB | AAN62317.1 | putative DNA topoisomerase III | Not tested | PAGI-3(SG) | Protein | 6e-178 | 59 |
| pph56 | CAI36097.1 | Topoisomerase IA | Not tested | PPHGI-1 | Protein | 1e-179 | 58 |
| topB | AAN62194.1 | putative DNA topoisomerase III | Not tested | PAGI-2(C) | Protein | 0.0 | 57 |
| PMI2630 | YP_002152332.1 | DNA topoisomerase III | Not tested | Not named | Protein | 5e-154 | 49 |
| topB | NP_458624.1 | topoisomerase B | Not tested | SPI-7 | Protein | 5e-151 | 47 |
| topB | NP_807836.1 | DNA topoisomerase III | Not tested | SPI-7 | Protein | 5e-151 | 47 |
| topB | AAF14809.1 | topoisomerase B | Not tested | SPI-7 | Protein | 4e-151 | 47 |
| topB1 | YP_005176228.1 | DNA topoisomerase III | Not tested | ICEPmu1 | Protein | 1e-140 | 47 |
