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Name : YSA_07180 (YSA_07180) Accession : YP_006387764.1 Strain : Pseudomonas putida ND6 Genome accession: NC_017986 Putative virulence/resistance : Virulence Product : general secretion pathway protein F Function : - COG functional category : - COG ID : - EC number : - Position : 3888270 - 3889472 bp Length : 1203 bp Strand : + Note : - DNA sequence : ATGCCGACCTATCGCTACCAGGCCGTTGACCTCGCCGGCAAATCGCACAAGGCCAGCCTGCAGGCTGACAGTGAACGCCA CGCCCGCCAGCTGTTGCGCGAGCAGGGCCTGTTCGCCCGCCAGTTGCAGCGTCATGAAGCCGGCAGCCGACAACCCCGTC GCCAGCGCCTGAGCCGCGCCCAGCTGTGTGAGCTGACCCGTCAGCTGGCCACCTTGACCGGGGCCGGCATTCCCTTGGTC GATGCCCTTGCCACCCTTGAACGGCAACTGCGTCAGCCCGCCTTGCACAGTGTGCTGGTGGCCTTGCGCGGCTCGCTGGC CGAAGGCCTGGGCCTGGCCCGCAGCCTGGCCCGGCAGGGTGCACCGTTCACTGGCCTGTACTGCGCGCTGGTCGAGGCCG GCGAACGTTCCGGGCACCTGGCCCAGGTGCTGACCCGCTTGGCCGACCACCTGGAGCAGGTGCAACGCCAGCAACACAAG GCCCGCACAGCGCTGATCTACCCCGCTGTGCTGATGGGTGTGTCGCTGGCAGTGGTGATTGGCCTGATGACGTTCGTCGT GCCCAAACTTACCGAGCAATTCGCCCATGCCGGGCAAAGCCTGCCGCTGATCACCTCGTTGCTGATCGGCCTGAGCCAGG GCCTGGTGCATGCCGGGCCCTGGTTGTTAGGGGGGGCGCTGTTGCTCGGGGGGCTGGGCGGCTGGCTGCTGCGCAAACCG CACTGGTGCCTGCGTCGCGACCAGCTGCTGCTGCGCCTGCCGCGTATTGGCGGCCTGCTGCAGGTGCTGGAGAGCGCGCG CCTGGCGCGCAGCCTGGCGATTCTCTGTGGCAGTGGCGTGGCCCTGCTCGAAGCCTTGCAAGTGGCCACCGAAACCATCG GCAACCGGCGTATCCGCTTGGCCATGGAGCAGGTGCGCCAACACGTGCAGGGCGGCACCAGCCTGCACCGTGCGCTGGAT GCCAGCCAGCAATTCCCGCCGCTGCTGGTGAACATGGTCGGCAGCGGCGAGGCCAGCGGCACCCTCGCGGACATGCTCGA GCGCGTGGCCGACGACCAGGAGCGCGGCTTTGCCCGCCAGGTCGATACCGCCATGGCGCTGTTCGAACCCCTGATGATCC TGGTGATGGGCGCCGTGGTGCTGTTCATCGTGCTGGCGGTGCTGCTGCCGATCATGCAACTCAACCAGGGCCTGCAATTG TGA Protein sequence : MPTYRYQAVDLAGKSHKASLQADSERHARQLLREQGLFARQLQRHEAGSRQPRRQRLSRAQLCELTRQLATLTGAGIPLV DALATLERQLRQPALHSVLVALRGSLAEGLGLARSLARQGAPFTGLYCALVEAGERSGHLAQVLTRLADHLEQVQRQQHK ARTALIYPAVLMGVSLAVVIGLMTFVVPKLTEQFAHAGQSLPLITSLLIGLSQGLVHAGPWLLGGALLLGGLGGWLLRKP HWCLRRDQLLLRLPRIGGLLQVLESARLARSLAILCGSGVALLEALQVATETIGNRRIRLAMEQVRQHVQGGTSLHRALD ASQQFPPLLVNMVGSGEASGTLADMLERVADDQERGFARQVDTAMALFEPLMILVMGAVVLFIVLAVLLPIMQLNQGLQL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspF | YP_854405.1 | type II secretion protein GspF | Not tested | PAI I APEC-O1 | Protein | 1e-49 | 42 |
| gspF | CAE85232.1 | GspF, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 2e-48 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| YSA_07180 | YP_006387764.1 | general secretion pathway protein F | VFG2049 | Protein | 8e-48 | 41 |
