Gene Information

Name : YSA_06049 (YSA_06049)
Accession : YP_006387154.1
Strain : Pseudomonas putida ND6
Genome accession: NC_017986
Putative virulence/resistance : Unknown
Product : riboflavin biosynthesis protein RibD
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3268562 - 3269698 bp
Length : 1137 bp
Strand : +
Note : -

DNA sequence :
GTGAACATGCCCAGCCAAGCTGCCATTCTCGACGCCCACTACATGGCCCGCGCGCTGGAGCTGGCGCGTAAAGGCCTGTA
CACCACCCACCCGAACCCGCGCGTAGGCTGCGTGATCGTGCGTGATGGTGAAGTGGTTGGCGAAGGTTGGCACGTTCGCG
CCGGCGAGCCTCATGCCGAAGTGCATGCCCTGCGCCAGGCCGGTGAACTTGCCCGCGGTGCTTGTGCCTACGTCACCCTG
GAACCATGCAGCCATCATGGCCGTACGCCACCGTGTGCCGAGGCACTGGTCAAGGCCGGCGTGACGCGTGTCGTAGCCGC
CATGCAGGACCCTAACCCGCAAGTGGCGGGACAGGGCCTGCGGCGCCTGGCCGAAGCCGGAATCGAAGTGGCCAGCGGAG
TGCTCGAAGCCGAGGCCCGCGCCCTCAACCCAGGCTTCCTCAAGCGCATGGAGCACGGCCTGCCGTTCGTTCGCGCCAAG
CTGGCCATGAGCCTGGACGGCCGCACGGCCATGGCCAGTGGTGAAAGCCAGTGGATCACCGGGCCGGCCGCGCGCTCAGC
CGTGCAGCGCTTGCGCGCCCGCTCCAGCGTGGTGCTGACCAGCGCCGCCAGCGTGCTGGCAGACAACGCACGCATGACCG
TGCGTGGCGCCGAGCTGGGCCTGGATGCCGAAACAGCCGCCCTGGCACTCAGCCGCACACCCTTGCGGGTGCTGGTCGAT
GGCCGCCTGCGCCTGCCACTGGCGGCGCCGTTCTTCCAGGCGGGCCCAGCGCTGGTGGTGACTGCTGTCGCAGATGACCC
GCGCTATGCCGCTGCCGGCCACGAATTGCTCAGCTTGCCGGGCGACAATGGCCAGGTCGACCTGGCGGCGCTGCTTCGCG
CCCTGGCTGCCCGCGGCGTCAACGAAGTCCTGCTGGAAGCCGGTGCCGGCCTGGTCGGTGCCTTTGCACGGCAAGGCCTG
GTCGACGAGTACCAGCTGTTCGTCGCTGGCACCTTCCTCGGCTCTCAGGCCCGGCCGCTGCTGGACTGGCCGATGGACAA
GATGAGCGAAGCACCACGGCTGAAAATTACCGAAATGCGCGCAGTGGGCGATGACTGGCGGGTCACGGCCATCCCCCTGC
CAGCACCCGGCGTATAA

Protein sequence :
MNMPSQAAILDAHYMARALELARKGLYTTHPNPRVGCVIVRDGEVVGEGWHVRAGEPHAEVHALRQAGELARGACAYVTL
EPCSHHGRTPPCAEALVKAGVTRVVAAMQDPNPQVAGQGLRRLAEAGIEVASGVLEAEARALNPGFLKRMEHGLPFVRAK
LAMSLDGRTAMASGESQWITGPAARSAVQRLRARSSVVLTSAASVLADNARMTVRGAELGLDAETAALALSRTPLRVLVD
GRLRLPLAAPFFQAGPALVVTAVADDPRYAAAGHELLSLPGDNGQVDLAALLRALAARGVNEVLLEAGAGLVGAFARQGL
VDEYQLFVAGTFLGSQARPLLDWPMDKMSEAPRLKITEMRAVGDDWRVTAIPLPAPGV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00289 YP_008207754.1 Pyrimidine deaminase Not tested AbaR25 Protein 8e-59 48
BJAB0868_00293 YP_008211619.1 Pyrimidine deaminase Not tested AbaR26 Protein 8e-59 48