|
Name : YSA_05541 (YSA_05541) Accession : YP_006386883.1 Strain : Pseudomonas putida ND6 Genome accession: NC_017986 Putative virulence/resistance : Unknown Product : presumed portal vertex protein Function : - COG functional category : - COG ID : - EC number : - Position : 2994981 - 2995829 bp Length : 849 bp Strand : + Note : - DNA sequence : TTGATCTTTAAGCGCAACGCCTTGGCCCGGACATTCATCCCTCACAGGCTGCTGACGCGCCAGGCGTTCGAGCAGATCGT TATGGATCTGGGGTGGTCGGGCAATCTTTACCTGGAAAAGCGCGACAACATGCTTGGCCGGGCGATGGGGCTTCGGCCTT GCCTGGCCAAGTACATGCGCCGTGGTGCGGATCTGGAGACCTATTACCAGGTGCGCCGTGGTGCGGATCTGGAGACCTAT TACCAGGTGCGCGGTTGGCGGGACGAGCATGAGTTCAGGGCGGGCAGCATCAGCCACCTGCGTGTGGCTGATATCAACCA GGAGGTTTATGGCCTGCCGGAGTGGTTGCCTGCGCTGCAGGCCGCGTTGCTCAATGAGTCGGCCACGCTGTTCCGCCGGA AGTACTACCAGAACGGGAGCCATGCGGGCTTCATTCTGTACATGACCGACGCAGCCCAGAACGAAGATTTTGTCGACGAC CTGCGTACGGCGATGAAAAGCAGCAAGGGCCCGGGCAACTTCCGCAACTTGTTCATGTACGCGCCCAATGGCAAGAAGGA CGGCATTCAGCTGATCCCGATCAGCGAGGTGGCGGCAAAGGATGACTTCGGCGCGATCAAGAACATCAGTCGGGATGACC AGCTGGCTATGCTGAGAATTCCACCCCAGCTGATGGGGGTGGTCCCACAGAACGCGGGCGGCTTCGGCTCGGTTCGTGAC GCCACTCAAGTTTGGGCCATGAACGAGTTAGAGCCGGAACAGGCCAGGCTGTTGCAGATCAATGAGTGGTTGGGTGAAGA GGTGATCCGCTTCCAGCCGTATGAAGTTCCCACCGGAAACGTAAGCTGA Protein sequence : MIFKRNALARTFIPHRLLTRQAFEQIVMDLGWSGNLYLEKRDNMLGRAMGLRPCLAKYMRRGADLETYYQVRRGADLETY YQVRGWRDEHEFRAGSISHLRVADINQEVYGLPEWLPALQAALLNESATLFRRKYYQNGSHAGFILYMTDAAQNEDFVDD LRTAMKSSKGPGNFRNLFMYAPNGKKDGIQLIPISEVAAKDDFGAIKNISRDDQLAMLRIPPQLMGVVPQNAGGFGSVRD ATQVWAMNELEPEQARLLQINEWLGEEVIRFQPYEVPTGNVS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | ABR13463.1 | predicted capsid packaging protein | Not tested | PAGI-6 | Protein | 8e-86 | 69 |
| STY4628 | NP_458710.1 | probable capsid portal protein | Not tested | SPI-7 | Protein | 4e-73 | 61 |
| t4321 | NP_807917.1 | capsid portal protein | Not tested | SPI-7 | Protein | 4e-73 | 61 |
