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Name : YSA_05475 (YSA_05475) Accession : YP_006386843.1 Strain : Pseudomonas putida ND6 Genome accession: NC_017986 Putative virulence/resistance : Unknown Product : S1 RNA-binding domain-containing protein Function : - COG functional category : - COG ID : - EC number : - Position : 2955557 - 2958100 bp Length : 2544 bp Strand : - Note : - DNA sequence : ATGAATAACTCCTCTGATATCGCCGCGCATTATGGCGTAGCCATTGCTGCACGTTGCGTGAGCATTGTTAGCAGATTTTT CCCCCGGCGCCAGTTCCGGCTGGCCGGGCGCCATCACCGCAAGCCGTTTGCGATGGGTATAATGCGCGGCTTTCATCCAG CGCCGCCGGGCAAAAAGCCCACAGGCGACCCCCGTATTCACAAATGTCAGGTGGTTTACATGGACAGCATCAACAGCCGT ATCGCCGAGGAACTGGGCGTACGCCCGCAGCAGGTCGAGGCGGCCGTGAGCCTGTTGGACGAAGGCTCGACCGTGCCCTT CATCGCCCGCTACCGCAAGGAAGTGACCGGTAGCCTTGACGACACTCAGTTGCGCCACCTGGAAGAGCGCCTGCGCTACC TGCGCGAACTCGACGAGCGCCGCGCCAGCATCCTTTCCAGCATCGAGGAACAGGGCAAGCTGACCCCGGAACTGGCCCGC GAGATCAAGCTGGCCGACACCAAGACCCGCCTCGAAGACCTGTACCTGCCCTACAAGCAGAAACGCCGCACCAAGGGCCA GATCGCCCTGGAAGCCGGCCTCGGCGAACTGGCCGATGGCCTGTTCAACGACCCGACCCTGGCCCCGGAAAGCGAAGCCG CACGCTTCGTCAACGTCGAAAAGGGCGTGGCCGACGTCAAGGCCGCGCTGGAAGGCGCCAAATACATCCTGATGGAGCGC TTTGCCGAAGACGCCGCCCTGCTCGACAAGCTGCGCAGCTATCTCAAGCAGGAAGCCGTGCTCAGCGCCCGCGTCGTGGC TGGCAAGGAAGAAGAAGGCGCCAAGTTCCGCGACTACTTCGCTCATGACGAGCTGCTGCGTACTGCGCCATCGCACCGTG CCCTGGCGATCTTCCGCGGGCGCAACGAAGGCGTGTTGAGCGTCTCGCTGAAGGTCGGCGAAGAACTGCCCGGCACCCTG CACCCGTGCGAACTGATGATCGGCAACCACGTCGGCATCGAAAACCGCAGCCGACCCGCCGACAAGTGGCTGGGAGAAGT GGTGCGCTGGACCTGGAAGGTCAAGCTGTACACCCACCTGGAGACCGACCTGTTCGGCGAGCTGCGTGACAATGCCGAAG GCGAGGCGATCAACGTGTTCGCCCACAACCTGCACGATCTGCTGCTGGCCGCCCCGGCCGGTCCGCGCGCCACCCTGGGC TTCGACCCAGGCCTGCGTACGGGCTGCAAGATCGCCGTGGTCGACGCAACCGGCAAACTGCTGGACCACACCACGGTCTA CCCGCACGCGCCGAAGAACGACTGGGACCGCACCATTTCCATCATGGCCGCACTGTGCGCCAAACACTCGGTGGAGCTGA TCGCCATCGGCAACGGTACCGCCAGCCGCGAAAGCGACAAGCTGGTGGCCGAGCTGGTCAAGAAATATCCAGCCCTGAAA ATCACCAAGATCATGGTCTCCGAAGCCGGTGCTTCGGTGTACTCGGCATCGGAACTGGCCGCCCGCGAGTTCCCGGACCT GGACGTGTCGATCCGCGGCGCCGTATCGATCGCCCGCCGCCTGCAGGATCCGCTGGCCGAACTGGTGAAGATCGATCCGA AATCAATCGGTGTCGGCCAGTACCAGCACGACGTGTCCCAGCTGAAACTGGCACGTGGCCTGGACGCGGTGGTCGAGGAC TGTGTGAACGCCGTGGGCGTGGACGTGAACACCGCTTCGGTGGCGCTGCTGACGCGCATCTCCGGCCTCAATGCCACGCT GGCACAGAACATCGTCGCCCACCGCGATGCCAATGGCCCGTTTGCTACCCGTGCAGCGCTGAAAAAGGTTAGCCGCCTGG GTGAGAAAACCTTCGAGCAGGCCGCCGGCTTCCTGCGTGTGATGAACGGCGACAACCCGCTGGACGCCTCTGCGGTGCAC CCTGAGGCTTACCCGCTGGTGCAGCGCATTGCTGCCGATACCGACCGCGACATCCGCTCGCTGATTGGTGACAGCAGCTT CCTCAAGCGCCTGGACCCGAAAAAGTTCACCGACGAAACCTTCGGCCTGCCAACTGTCACCGACATCCTGCAAGAGCTGG ACAAGCCCGGCCGCGACCCGCGTCCGGAGTTCAAGACCGCCACCTTCCAGGACGGCGTCGAAGACCTCAAGGACCTGGAA CCGGGCATGATCCTCGAAGGCGTGGTGACCAACGTTACCAACTTCGGTGCCTTCGTCGACATCGGCGTGCACCAGGACGG CCTGGTGCATATCTCGGCGCTGTCGGAGAAGTTCGTCAAAGACCCGCGTGAAGCGGTCAAGGCCGGCGATGTGGTCAAGG TCAAGGTCATGGAAGTGGACATCCCGCGCAAACGCGTCGGCCTGTCCATGCGCATGAGCGACACCCCGGGCGAGAAGGTC GAAGGCAACCGCGGTGGTAACCGCGGCAATGGTGGCAGCCGCCAGCAGCAGGCACCGCGCCAGCGTGAAACCGCCACGGC TGCGCCGGCCAACAACGCCATGGCCTCGCTGTTCGCCAACGCCAAGCAATTGAAGAAGAAGTAA Protein sequence : MNNSSDIAAHYGVAIAARCVSIVSRFFPRRQFRLAGRHHRKPFAMGIMRGFHPAPPGKKPTGDPRIHKCQVVYMDSINSR IAEELGVRPQQVEAAVSLLDEGSTVPFIARYRKEVTGSLDDTQLRHLEERLRYLRELDERRASILSSIEEQGKLTPELAR EIKLADTKTRLEDLYLPYKQKRRTKGQIALEAGLGELADGLFNDPTLAPESEAARFVNVEKGVADVKAALEGAKYILMER FAEDAALLDKLRSYLKQEAVLSARVVAGKEEEGAKFRDYFAHDELLRTAPSHRALAIFRGRNEGVLSVSLKVGEELPGTL HPCELMIGNHVGIENRSRPADKWLGEVVRWTWKVKLYTHLETDLFGELRDNAEGEAINVFAHNLHDLLLAAPAGPRATLG FDPGLRTGCKIAVVDATGKLLDHTTVYPHAPKNDWDRTISIMAALCAKHSVELIAIGNGTASRESDKLVAELVKKYPALK ITKIMVSEAGASVYSASELAAREFPDLDVSIRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDVSQLKLARGLDAVVED CVNAVGVDVNTASVALLTRISGLNATLAQNIVAHRDANGPFATRAALKKVSRLGEKTFEQAAGFLRVMNGDNPLDASAVH PEAYPLVQRIAADTDRDIRSLIGDSSFLKRLDPKKFTDETFGLPTVTDILQELDKPGRDPRPEFKTATFQDGVEDLKDLE PGMILEGVVTNVTNFGAFVDIGVHQDGLVHISALSEKFVKDPREAVKAGDVVKVKVMEVDIPRKRVGLSMRMSDTPGEKV EGNRGGNRGNGGSRQQQAPRQRETATAAPANNAMASLFANAKQLKKK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| NMB0075 | NP_273139.1 | transcriptional accessory protein Tex | Not tested | IHT-A | Protein | 0.0 | 63 |
