Gene Information

Name : YSA_05374 (YSA_05374)
Accession : YP_006386786.1
Strain : Pseudomonas putida ND6
Genome accession: NC_017986
Putative virulence/resistance : Unknown
Product : porphobilinogen deaminase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2902225 - 2903166 bp
Length : 942 bp
Strand : +
Note : -

DNA sequence :
ATGTCCACTCGCGAAATCCGCATTGCCACCCGTAAAAGTGCTTTGGCCCTGTGGCAGGCCGAATACGTCAAGGCCCGCCT
CGAGCAGGCCCACACCGGTCTGCAGGTGACCTTGGTGCCCATGGTCAGCCGCGGTGACAAGTTGCTCGACGCGCCGCTGG
CAAAAATCGGCGGCAAGGGGCTGTTCGTCAAGGAACTGGAAACCGCGCTGTTGGACAACGAAGCCGACATCGCCGTGCAC
TCGATGAAAGACGTGCCCATGGACTTCCCCGAGGGCCTGGGCCTGTACTGCATCTGCGAGCGTGAAGACCCGCGTGATGC
CTTCGTTTCCAATACCTTTGACAGCCTCGAAACGCTGCCCGCCGGCAGTATCGTCGGTACCTCAAGCCTGCGCCGTCAGG
CCCAGTTACTGGCGCGCCGCCCAGACCTGCAAATCCGCTTTCTGCGCGGCAACGTCAACACCCGCCTGGCGAAGCTGGAT
GCCGGCGAGTACGACGCCATCATCCTCGCCGCGGCGGGCCTGATCCGTCTGGGCTTCGAGGACCGCATCACCTCCACCAT
CAGCGTCGATGACAGCCTGCCGGCAGGTGGTCAGGGCGCGGTGGGCATCGAGTGCCGCAGTGCCGACGTTGAGATTCATG
CACTGCTGGCGCCACTGCACCATGTCGACACCGCTGACCGGGTGATCGCCGAGCGCGCGCTGAACAAACGCCTGAATGGT
GGCTGCCAAGTGCCGATCGCCTGCTACGCGGTCCTTGAAGGTGACCAGCTGTGGCTGCGCGGCCTGGTCGGCCAGCCTAG
CGGCGGGACCTTGCTGGTGGCCGATGCCCGTGCACCCCGTGCTGCTGCCGAGGCCCTGGGCGTACAGGTGGCCGAAGACC
TGCTGGGGCAGGGCGCCGAGGCCATTCTGAAGGAAGTCTACGGCGAGGCCGGTCACCCATGA

Protein sequence :
MSTREIRIATRKSALALWQAEYVKARLEQAHTGLQVTLVPMVSRGDKLLDAPLAKIGGKGLFVKELETALLDNEADIAVH
SMKDVPMDFPEGLGLYCICEREDPRDAFVSNTFDSLETLPAGSIVGTSSLRRQAQLLARRPDLQIRFLRGNVNTRLAKLD
AGEYDAIILAAAGLIRLGFEDRITSTISVDDSLPAGGQGAVGIECRSADVEIHALLAPLHHVDTADRVIAERALNKRLNG
GCQVPIACYAVLEGDQLWLRGLVGQPSGGTLLVADARAPRAAAEALGVQVAEDLLGQGAEAILKEVYGEAGHP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00327 YP_008207792.1 Porphobilinogen deaminase Not tested AbaR25 Protein 3e-67 60
BJAB0868_00331 YP_008211657.1 Porphobilinogen deaminase Not tested AbaR26 Protein 3e-67 60