Gene Information

Name : YSA_05372 (YSA_05372)
Accession : YP_006386785.1
Strain : Pseudomonas putida ND6
Genome accession: NC_017986
Putative virulence/resistance : Virulence
Product : LytTR family two component transcriptional regulator
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2901363 - 2902106 bp
Length : 744 bp
Strand : +
Note : -

DNA sequence :
ATGAATGTCCTGATCGTTGATGACGAACCCCAAGGCCGTGAACGCCTCAGCCGGCTGCTCGGCGAACTGGAGGGTTACAC
TGTGCTGGAGCCCAGCGCCACCAACGGCGATGAGGCCTTGGCGCTGATTGAAAGCCTCAAGCCCGATGTGGTCCTGCTGG
ACATCGGCATGCCAGGCCTGGATGGCCTGCAGGTTGCCGCTCGCCTGTGCGAACGCGAGGCGCCGCCGGCGGTGGTGTTT
TGCTCCGGGGATGATGAATACGGTGCAGAGGCATTCAAGGACAGTACCCTCAGCCATGTGACCAAGCCCTTCCAGGCCCA
GGCCTTGCGCGATGCCTTGCGCAAGGCCGAAAAACCCAACCGCGCCCAATTGGCGGCGCTTACCCGGCCGGCCAATGAAG
GCGGCGGCCCTCGCAGCCATATAAGTGCCCGCACGCGTAAAGGCATCGAACTGATCCCTTTATCCCAGGTGATCTATTTC
ATTGCCGACCACAAGTATGTGACCTTGCGTCACGAAACCGGGGAGGTGCTGCTTGACGAGCCACTCAAAGCCCTGGAAGA
CGAATTCGGCGAACGCTTCGTGCGCATCCACCGCAATGCGTTGGTCGCCCGCGAGCGCATCGAACGCTTGCAGCGCACCC
CGCTGGGGCACTTTCAGCTGTATCTGAAAGGCCTGGACGGCGATGCCTTGACCGTCAGCCGTCGCCATGTGGCCGGTGTG
CGCAAGATGATGCAGACCCTCTGA

Protein sequence :
MNVLIVDDEPQGRERLSRLLGELEGYTVLEPSATNGDEALALIESLKPDVVLLDIGMPGLDGLQVAARLCEREAPPAVVF
CSGDDEYGAEAFKDSTLSHVTKPFQAQALRDALRKAEKPNRAQLAALTRPANEGGGPRSHISARTRKGIELIPLSQVIYF
IADHKYVTLRHETGEVLLDEPLKALEDEFGERFVRIHRNALVARERIERLQRTPLGHFQLYLKGLDGDALTVSRRHVAGV
RKMMQTL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00326 YP_008207791.1 Response regulator of the LytR/AlgR family Not tested AbaR25 Protein 1e-42 43
BJAB0868_00330 YP_008211656.1 Response regulator of the LytR/AlgR family Not tested AbaR26 Protein 1e-42 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
YSA_05372 YP_006386785.1 LytTR family two component transcriptional regulator VFG0119 Protein 5e-89 79