Gene Information

Name : YSA_04857 (YSA_04857)
Accession : YP_006386515.1
Strain : Pseudomonas putida ND6
Genome accession: NC_017986
Putative virulence/resistance : Resistance
Product : ATP-dependent DNA helicase RecG
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2629018 - 2631096 bp
Length : 2079 bp
Strand : +
Note : -

DNA sequence :
ATGAGTGAGTTGTCGAAGGTCCCGGTCACAGTACTGAAAGGCGTGGGCGAGGCGATGGCGGAGAAACTCGCCAAGGTCGG
CCTGGAAAACCTGCAGGACGTGTTGTTCCACCTGCCCCTGCGCTACCAGGACCGTACGCGCGTGGTGCCAATCGGCCAAC
TGCGTCCCGGCCAGGATGCGGTTATCGAGGGTGTGGTCAGTGGTGCCGATGTGACCATGGGCAAGCGCCGCAGCCTGGTG
GTGCGCCTGGGCGACGGCAGCGGTGTGCTGACATTGCGCTTCTACCACTTCAGCAACGCGCAGAAGGAGAGCCTGAAGCG
GGGCACCCACCTGCGCTGCTACGGAGAAGCCCGCCCCGGCGCTTCGGGCCTGGAAATCTACCATCCGGAGTACCGTGCGC
TGAACGGCAACGAGCCACCACCGCCGGTGGAGCAGACCCTGACGCCGATCTACCCGTCCACCGAAGGCCTTACCCAGCAA
CGCCTGCGCCTGTTGTGCCAGCAGAGCCTTGCGCTGCTTGGCCCGCGTAGCCTGCCCGACTGGCTGCCTGACGAACTTGC
CCGGGACTACCAGCTGGCACCCTTGGACGAAGCCATCCGCTACCTGCACAACCCGCCGGCCGACGCTGACCTCGATGAGC
TCGCCGAAGGCCAGCACTGGGCTCAACACCGCCTGGCCTTCGAAGAGTTGCTGACCCATCAGCTGTCGCAGCAACGCCTG
CGCGAAAGCCTGCGCAGCCTGCGTGCGCCGGTACTGCCCAAGGCCACGCGCCTGCAGGCGCAATACCTGGCTAACCTGGG
CTTCCAGCCGACCGGCGCGCAGCAGCGGGTAGCCAACGAAATTGCCTACGACCTTAGCCAACACGAACCGATGATGCGCC
TGGTGCAGGGCGACGTGGGTGCCGGCAAGACCGTGGTCGCTGCACTGGCGGCGCTGCAGGCGCTGGAGGCTGGCTACCAG
GTGGCATTGATGGCACCCACCGAGATCCTCGCCGAGCAGCACTACATTACCTTCAAGCGCTGGCTGGAACCGCTGGGCAT
CGAAGTCGCCTGGCTAGCCGGCAAACTCAAGGGCAAGGCCCGGGCCGCCTCCCTGGAGCAGATCGCCAACGGCGCACCCA
TGGTGGTCGGCACCCACGCGCTGTTCCAGGAAGAGGTAAGGTTCAAGCACCTGGCCCTTGCGATCATCGACGAACAGCAC
CGGTTCGGCGTGCAGCAGCGCCTGGCCCTGCGCAAGAAGGGTGTGGCCGGCGAACTGTGCCCGCACCAGTTGATCATGAC
CGCCACACCTATTCCGCGCACGCTGGCCATGAGCGCCTACGCCGACCTGGACACCTCGGTGCTCGACGAATTGCCGCCAG
GCCGTACGCCGGTGAACACCGTGCTGGTGGCCGACAGCCGCCGCTTCGAAGTGGTCGAGCGGGTACGCGCCGCCTGCGCC
GAGGGGCGCCAGGCCTATTGGGTATGCACGCTGATCGAAGAGTCCGAAGAACTCACCTGCCAGGCCGCCGAAAGCACCTA
CGAGGAGCTTGGCAGCGCGCTAGGCGAGCTGAGGGTGGGGTTGATCCACGGGCGCATGAAACCGGCGGAAAAAGCCGAGA
TCATGGCCGAGTTCAAGGCTGGCAACCTGCAGCTTCTGGTCGCGACCACGGTCATCGAGGTGGGCGTGGACGTGCCCAAC
GCCAGCCTGATGATCATCGAGAACCCTGAGCGCCTGGGCCTTGCACAGTTGCACCAGCTGCGCGGCCGGGTAGGCCGAGG
CAGTGCCGTGAGCCATTGCGTGCTGCTGTACCACCCGCCGCTGTCGCAGATCGGCCGCGAGCGCTTGGGGATCATGCGCG
AGACCAACGACGGCTTCATCATCGCCGAAAAAGACCTTGAACTGCGTGGCCCGGGCGAGATGCTCGGCACCCGCCAGACC
GGTCTACTGCAGTTCAAGGTCGCCGACCTGATGCGCGACGCCGACCTGCTGCCGGCCGTGCGCGACGCGGCCCAAGCCTT
GGTATCACGCTGGCCGGAACACGTCAGCCCGCTGCTGGACCGCTGGCTGCGCCACGGCCAACAATATGGCCAAGTGTGA

Protein sequence :
MSELSKVPVTVLKGVGEAMAEKLAKVGLENLQDVLFHLPLRYQDRTRVVPIGQLRPGQDAVIEGVVSGADVTMGKRRSLV
VRLGDGSGVLTLRFYHFSNAQKESLKRGTHLRCYGEARPGASGLEIYHPEYRALNGNEPPPPVEQTLTPIYPSTEGLTQQ
RLRLLCQQSLALLGPRSLPDWLPDELARDYQLAPLDEAIRYLHNPPADADLDELAEGQHWAQHRLAFEELLTHQLSQQRL
RESLRSLRAPVLPKATRLQAQYLANLGFQPTGAQQRVANEIAYDLSQHEPMMRLVQGDVGAGKTVVAALAALQALEAGYQ
VALMAPTEILAEQHYITFKRWLEPLGIEVAWLAGKLKGKARAASLEQIANGAPMVVGTHALFQEEVRFKHLALAIIDEQH
RFGVQQRLALRKKGVAGELCPHQLIMTATPIPRTLAMSAYADLDTSVLDELPPGRTPVNTVLVADSRRFEVVERVRAACA
EGRQAYWVCTLIEESEELTCQAAESTYEELGSALGELRVGLIHGRMKPAEKAEIMAEFKAGNLQLLVATTVIEVGVDVPN
ASLMIIENPERLGLAQLHQLRGRVGRGSAVSHCVLLYHPPLSQIGRERLGIMRETNDGFIIAEKDLELRGPGEMLGTRQT
GLLQFKVADLMRDADLLPAVRDAAQALVSRWPEHVSPLLDRWLRHGQQYGQV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
recG CAJ77039.1 ATP-dependent DNA helicase Not tested AbaR1 Protein 7e-93 47

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
YSA_04857 YP_006386515.1 ATP-dependent DNA helicase RecG BAC0356 Protein 0.0 86