|
Name : YSA_04720 (YSA_04720) Accession : YP_006386441.1 Strain : Pseudomonas putida ND6 Genome accession: NC_017986 Putative virulence/resistance : Unknown Product : transposase IS66 Function : - COG functional category : - COG ID : - EC number : - Position : 2564881 - 2566416 bp Length : 1536 bp Strand : + Note : - DNA sequence : ATGACTTTCTCGCCCAACCTCGACCAGATGACCCCGGAACAGCTTCGTGCCTTGGCGGCACAGGCGTTGCAGTTGCAATC ACAGGTCGAGGCGATGAGCAGGAAGATCCAAAACGATGAAATCCTCATCGAACAGTTCAAGTTCGAAATCGCCCTGCTCA AACGGCACAAGTTTGCCAAGCGCAGCGAGCAAATCAGCCCGGCTCAAAGCAGCTTGCTGGATGACCTGCTCGACACAGAC CTTGAAGCTATCGAGGCCGAGCTAAAACAGCTCCTCCCAGCTGCGCCACAGTCCGAACCACGGCAATCCCCGAAACGTGC GCCCTTGCCGCCGCAGTTTCCACGCACCGTCATTCGCCATGAACCCGAAAACACTCAGTGCGCCTGTGGTTGCCAGCTCC AACGCATCGGCGAAGACGTCAGCGAAAAGCTGGATTACACGCCGGGCGTGTTTACCGTCGAGCAACATGTGCGGGGCAAA TGGGCCTGCCGTCAGTGTGAAACACTGATCCAGGCGCCGGTGCCGGCGCAGGTTATCGATAAAGGTATCCCGACCTCAGG TTTGTTGGCCCACGTGATGGTGGCCAAGTTTGCCGATCACTTGCCGCTGTATCGGCAGGAGAAGATTTTTGGCCGCGCCG GGCTGGCAATTGCTCGCTCGACCCTGGCGCAGTGGGTTGGACAAACCGGTGTGCGACTTCAGCCGTTGGTCGATGCACTG CGTGAAGCGGTGCTGAACCAGGGTGTGATCCACGCCGACGAAACACCGGTGCAAATGCTTGCGCCAGGCGAGAAGAAAAC CCACCGGGCTTATGTCTGGGCCTACAGCACCACGCCGTTTTCGGCGCTCAAGGCGGTGGTTTACGACTTCAGCCCAAGCC GTGCTGGCGAACATGCGCGCAACTTCCTGGGTGACTGGAACGGCAAGCTGGTCTGCGACGACTTCGCTGGCTACAAAGCC GGGTTTGAACAAGGCATCACTGAAATCGGTTGCATGGCCCACGCCCGTCGCAAGTTTTTCGATCTGCATGTGGCGAACAA AAGCCAATTGGCCGAACAGGCGCTGCACTCGATCAGCGGCCTGTACGAGGTCGAACGCCAGGCGCGAGACATGAGTGATG AAGATCGTTGGCGAATACGTCAGGAACTAGCGGTACCGATCAGCAAAACACTGCATGAGTGGATGTTGGCCCAGCGTGAC CTGGTGCCCAACGGATCAGCCACGGCCAAAGCCCTCGATTACAGCCTGAAACGCTGGGTAGCGCTGACGCGCTACCTGGA CGATGGGGCTGTGCCCATCGACAACAACCAGGTCGAGAACCAGATACGGCCATGGGCACTCGGGCGCTCGAACTGGTTGT TTGCCGGGTCGTTGCGCAGCGGCAAACGCGCGGCGGCGATCATGAGCTTGATCCAGTCGGCACGCATGAATGGGCATGAT CCGTATGCCTATCTCAAGGATGTGCTGACGCGGCTGCCGACCCAACGGGCCAGTGAGATCGGGCAGTTGCTGCCGCATCA GTGGGTACCGGCCTGA Protein sequence : MTFSPNLDQMTPEQLRALAAQALQLQSQVEAMSRKIQNDEILIEQFKFEIALLKRHKFAKRSEQISPAQSSLLDDLLDTD LEAIEAELKQLLPAAPQSEPRQSPKRAPLPPQFPRTVIRHEPENTQCACGCQLQRIGEDVSEKLDYTPGVFTVEQHVRGK WACRQCETLIQAPVPAQVIDKGIPTSGLLAHVMVAKFADHLPLYRQEKIFGRAGLAIARSTLAQWVGQTGVRLQPLVDAL REAVLNQGVIHADETPVQMLAPGEKKTHRAYVWAYSTTPFSALKAVVYDFSPSRAGEHARNFLGDWNGKLVCDDFAGYKA GFEQGITEIGCMAHARRKFFDLHVANKSQLAEQALHSISGLYEVERQARDMSDEDRWRIRQELAVPISKTLHEWMLAQRD LVPNGSATAKALDYSLKRWVALTRYLDDGAVPIDNNQVENQIRPWALGRSNWLFAGSLRSGKRAAAIMSLIQSARMNGHD PYAYLKDVLTRLPTQRASEIGQLLPHQWVPA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| RL059 | AAP84184.1 | transposase | Not tested | PAPI-1 | Protein | 0.0 | 96 |
| tnpC | AEZ06051.1 | transposase | Not tested | Tn6167 | Protein | 6e-137 | 55 |
| c3563 | NP_755438.1 | hypothetical protein | Not tested | PAI I CFT073 | Protein | 4e-64 | 42 |
| s0025 | CAD33772.1 | IS66-like transposase | Not tested | PAI I 536 | Protein | 2e-66 | 42 |
| ECO103_3554 | YP_003223421.1 | hypothetical protein | Not tested | LEE | Protein | 2e-68 | 41 |
| Z4317 | NP_289543.1 | hypothetical protein | Not tested | OI-122 | Protein | 8e-69 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| YSA_04720 | YP_006386441.1 | transposase IS66 | VFG1700 | Protein | 2e-64 | 42 |
| YSA_04720 | YP_006386441.1 | transposase IS66 | VFG1513 | Protein | 9e-67 | 42 |
