|
Name : YSA_04408 (YSA_04408) Accession : YP_006386270.1 Strain : Pseudomonas putida ND6 Genome accession: NC_017986 Putative virulence/resistance : Resistance Product : heavy metal translocating P-type ATPase Function : - COG functional category : - COG ID : - EC number : - Position : 2391564 - 2393696 bp Length : 2133 bp Strand : - Note : - DNA sequence : GTGCAACTGAGCGAAACGGCCAGTGCCCAGGCACAACTCAGTCGTTTCCGCATCGAGGCCATGGACTGCCCCACCGAGCA GACCCTGATTCAGGACAAACTGAGTAAGCTGGCCGGTATCGAACAGCTGGAATTCAACCTGATCAACCGCGTGCTTGGCG TGCGCCATACCTTGGACGGCACCGCCGATATCGAGCGGGCTATCGACAGCCTGGGCATGAAGGCCGAGCCGATTGCCGCC CAGGACGACGGCAGCGCCAGCGTGCCACAACCGGCCAAGGCCCGCTGGTGGCCACTGGCATTGTCGGGCGTCGCCGCGAT CGCCGCCGAAATCGTGCACTTTGCTGCACTGGCCCCTGAGTGGGTGGTAGCGGGACTGGCGCTTGCCGCGATCCTCGGTT GCGGCCTGGGTACCTACAAGAAGGGCTGGATTGCCCTGAAAAACCGTAACCTCAACATCAATGCGCTGATGAGTATTGCC GTGACGGGGGCCGTATTGATCGGCCAGTGGCCGGAAGCGGCTATGGTGATGGTGCTGTTCACCGTTGCCGAACTGATCGA AGCGCGCTCGCTGGACCGTGCGCGCAATGCCATCGGCGGGTTGATGCAGCTGACCCCGGACATGGCTACGGTGCAGCAGG CCGATGGCCAGTGGCGCGAGCTGGAAGTGCGTGAGGTGGCCATCGGCGCACTGGTGCGGGTGCGCCCCGGTGAGCGCATC GGCCTGGACGGTGAAGTGACCAGCGGGCAATCCAGCGTCGATCAGGCGCCGATTACCGGCGAAAGCCTGCCTGTGGAGAA GGGGGTGGGTGACAAGCTGTTCGCTGGCACCATCAACCAGGCGGGGGCGCTGGAGTTTCGCGTCACCGCCGCTGCCGGGC AGTCGACCCTGGCGCGGATCATCAAGGCTGTGGAGGAAGCGCAGGGCGCGCGGGCGCCTACCCAACGCTTCGTCGACCGT TTCTCGCGTATCTACACCCCGGTGGTATTCGCCATTGCCCTGGCCGTGGCGCTGTTGCCCCCGCTGTTCATGGCTGGCGC CTGGTTCGACTGGGTTTACCGCGCCTTGGTGCTGCTGGTGGTGGCCTGCCCCTGCGCGCTGGTGATCTCGACCCCGGTGA CCATCGTCAGTGGCCTGGCCGCCGCTGCGCGCAAAGGCATCCTGATCAAGGGTGGCGTGTACCTGGAGGGTGGCCGCCAC CTGGATTTCCTGGCCCTGGACAAGACCGGCACCATTACCCATGGCAAGCCGGTGCAGACTGACGCCAAGGTGCTGGCGCC GCTGTTCGAAGACCGTGCGCAAGCCTTGGCGGCCAGCCTGGGCGAGCGTTCGGACCACCCGGTGTCCCGCGCCATTGCCG AGTTCGGCAAGCAGCAAGGCCTGGCCTTGAGCGAGGTCAGTGACTTCGCCGCCCTGGCCGGGCGTGGCGTGCGTGGTGTC ATCGCCGGTGAGGTCTACCACTTGGGCAACCACCGCCTGGTCGAGGAACTGGGGCTGTGTTCGCCAGCGCTGGAGGCCCA GCTTGATGCGCTGGAGCGCCAGGGCAAGACCGTGGTCCTGCTGCTCGACCGATCCGGCCCTCTGGCACTGTTCGCCGTGG CCGACACGGTCAAGGACAGCAGCCGTCAGGCGATCGCCGAATTGCATCAACTGGGTATCAAGACTGTCATGCTGACCGGT GACAATCCGCATACTGCGCAGGCCATTGCCGCCGTGGTGGGGATCGACCGCGCCGAGGGCAACCTGTTGCCGGCCGACAA GCTGAAAACCATTGAGGCGTTGTACGCCCAAGGCCATCGGGTAGGCATGGTCGGTGACGGCATCAACGACGCCCCGGCGC TGGCCCGCGCCGAAATCGGTTTTGCCATGGCTGCTGCCGGCACCGACACCGCCATCGAGACGGCTGATGTGGCGCTGATG GACGATGACTTGCGCAAAATCCCGGCCTTCGTCAGGCTGTCGCGCCAAAGTGCGGCGATCCTCATGCAGAACATCGTTCT GGCGTTGGGCATCAAGGCGATATTTCTGGCGATCACCTTTGCCGGCATGGCCACGATGTGGATGGCGGTGTTCGCTGATA TGGGCGTGAGCTTGCTGGTGGTGTTCAACGGCTTGCGCCTTTTGCGCAAATAG Protein sequence : MQLSETASAQAQLSRFRIEAMDCPTEQTLIQDKLSKLAGIEQLEFNLINRVLGVRHTLDGTADIERAIDSLGMKAEPIAA QDDGSASVPQPAKARWWPLALSGVAAIAAEIVHFAALAPEWVVAGLALAAILGCGLGTYKKGWIALKNRNLNINALMSIA VTGAVLIGQWPEAAMVMVLFTVAELIEARSLDRARNAIGGLMQLTPDMATVQQADGQWRELEVREVAIGALVRVRPGERI GLDGEVTSGQSSVDQAPITGESLPVEKGVGDKLFAGTINQAGALEFRVTAAAGQSTLARIIKAVEEAQGARAPTQRFVDR FSRIYTPVVFAIALAVALLPPLFMAGAWFDWVYRALVLLVVACPCALVISTPVTIVSGLAAAARKGILIKGGVYLEGGRH LDFLALDKTGTITHGKPVQTDAKVLAPLFEDRAQALAASLGERSDHPVSRAIAEFGKQQGLALSEVSDFAALAGRGVRGV IAGEVYHLGNHRLVEELGLCSPALEAQLDALERQGKTVVLLLDRSGPLALFAVADTVKDSSRQAIAELHQLGIKTVMLTG DNPHTAQAIAAVVGIDRAEGNLLPADKLKTIEALYAQGHRVGMVGDGINDAPALARAEIGFAMAAAGTDTAIETADVALM DDDLRKIPAFVRLSRQSAAILMQNIVLALGIKAIFLAITFAGMATMWMAVFADMGVSLLVVFNGLRLLRK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ORF C97 | AAN62190.1 | putative metal-transporting P-type ATPase | Not tested | PAGI-2(C) | Protein | 0.0 | 67 |
| cadA | BAC57487.1 | Probable cadmium-transporting ATPase (Cadmium efflux ATPase) | Not tested | Type-IIIinv SCCmec | Protein | 1e-110 | 48 |
| unnamed | BAB47609.1 | cadmium resistance protein B | Not tested | Type-III SCCmec | Protein | 1e-110 | 48 |
| SE0075 | NP_763630.1 | cadmium resistance protein B | Not tested | SCCpbp4 | Protein | 1e-108 | 47 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| YSA_04408 | YP_006386270.1 | heavy metal translocating P-type ATPase | BAC0298 | Protein | 0.0 | 69 |
| YSA_04408 | YP_006386270.1 | heavy metal translocating P-type ATPase | BAC0455 | Protein | 8e-80 | 43 |
| YSA_04408 | YP_006386270.1 | heavy metal translocating P-type ATPase | BAC0461 | Protein | 1e-78 | 43 |
| YSA_04408 | YP_006386270.1 | heavy metal translocating P-type ATPase | BAC0092 | Protein | 1e-73 | 41 |
