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Name : YSA_04269 (YSA_04269) Accession : YP_006386193.1 Strain : Pseudomonas putida ND6 Genome accession: NC_017986 Putative virulence/resistance : Virulence Product : general secretory pathway protein E Function : - COG functional category : - COG ID : - EC number : - Position : 2310741 - 2312204 bp Length : 1464 bp Strand : - Note : - DNA sequence : ATGAGCATTGCCCTGCCGTTCAGCTTTGCCCGACGTCACGGCATCCTGCTCGACCACCAGGCAGCCGAGCATGCTTTGCT GATGCGTGAAGGCGCATCACTGTCGGCCATGGCCGAGGCCTGCAGGCTAGTGGGCAGTACCTGGCCTCTGCGTCGCGTGA GCGATGCCCACTTTGCCGAGCGCCTGGCCCAATGCTACGGCCCAGGCCAGGATGCCGCGCAGGCGGTGGTCCAGGGCCTT GACCAGGAAATCGACCTGTCGCGGTTGGCCGAAGCCTTGCCGCAGACCTGCGACCTGCTTGAGCAACAGGACGACGCGCC GATCATTCGCTTGCTCAACGCTTTGTTCAGCGAGGCGGTGAGATCGCGGGCCTCGGATATCCACCTGGAAACCTTCGAGC AGCAGCTGCGCGTGCGCATGCGCATCGACGGCGTCATGCGCGAAGTACTGACGCCGCCCCGGGAGCTGTCTGCCCTGCTG GTTTCGCGCATCAAGGTCATGGCGCGCCTGGATATCGCCGAAAAGCGTGTGCCCCAGGATGGCCGGATCAGCCTGCGTCT TGCCGGCCATGAAGTGGACGTGCGGGTGTCGACCTTGCCTGCTGCCCATGGCGAGCGGGTCGTGCTGCGCTTACTGGACA AGCAGGCAGTACGCCTCGACATCGATCACATGCAGATGCACAGCTCGGTGCGAGCGGGCTTCATGCACATGCTGGAAAAA CCGCACGGCATTTTTCTGGTCACCGGGCCCACCGGGTCCGGCAAGACCACGACACTGTATACCGCGCTGTCATACCTAAA CCAGGTATCCCGCAATATCCTCACCGTCGAGGACCCGATCGAGTATCACCTGCCCGGCATCGGCCAGACCCAGGTGAACA CCAAGGTCGACATGACCTTCGCCCGTGGCCTGCGCGCCATCCTGCGCCAGGACCCGGACGTGGTCATGGTGGGCGAAATC CGTGACCGGGAGACTGCGGACATCGCGGTGCAGGCCTCGCTGACCGGCCACCTGGTGCTGTCCACCCTGCATACCAACAG TGCGCTGGGGGCCATCACGCGCCTTGCCGACATGGGCATCGATACCTGTTTGCTTGCCTCATCGCTGGCCGGGGTGATGG CCCAGCGCCTGGTGCGGCGGCTCTGCGACCACTGCAAGGTCGTCTATGAGGTGGACGAGGCTACGGCCAGCGCTTTGGGC CACCCCGCCGGGTTGCCGTCGCAGCTCTACGAAGCGCAGGGCTGTAGCGAATGCCTGCAGGGTTACAGCGGGCGCCTGGC CTTGCACGAGATGGTGGTGGTGACGCCCGCATTGGCCCAGGCGATCCACGCCCGTGCGTCCGTGGCTGACATGTCCGAAG TGATCCGCGCGGCCACACCAAGCTTGTTCCAGCATGGCGTCCAGCGTGTCTGCCTGGGGCAGACCAGCCTGGCAGAGCTG CTGCGTGTGACGGGGCAGGGCTGA Protein sequence : MSIALPFSFARRHGILLDHQAAEHALLMREGASLSAMAEACRLVGSTWPLRRVSDAHFAERLAQCYGPGQDAAQAVVQGL DQEIDLSRLAEALPQTCDLLEQQDDAPIIRLLNALFSEAVRSRASDIHLETFEQQLRVRMRIDGVMREVLTPPRELSALL VSRIKVMARLDIAEKRVPQDGRISLRLAGHEVDVRVSTLPAAHGERVVLRLLDKQAVRLDIDHMQMHSSVRAGFMHMLEK PHGIFLVTGPTGSGKTTTLYTALSYLNQVSRNILTVEDPIEYHLPGIGQTQVNTKVDMTFARGLRAILRQDPDVVMVGEI RDRETADIAVQASLTGHLVLSTLHTNSALGAITRLADMGIDTCLLASSLAGVMAQRLVRRLCDHCKVVYEVDEATASALG HPAGLPSQLYEAQGCSECLQGYSGRLALHEMVVVTPALAQAIHARASVADMSEVIRAATPSLFQHGVQRVCLGQTSLAEL LRVTGQG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspE | YP_854406.1 | type II secretion protein GspE | Not tested | PAI I APEC-O1 | Protein | 1e-122 | 55 |
| gspE | CAE85233.1 | GspE, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 8e-123 | 55 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| YSA_04269 | YP_006386193.1 | general secretory pathway protein E | VFG0182 | Protein | 3e-129 | 61 |
| YSA_04269 | YP_006386193.1 | general secretory pathway protein E | VFG1876 | Protein | 1e-130 | 56 |
| YSA_04269 | YP_006386193.1 | general secretory pathway protein E | VFG2048 | Protein | 2e-122 | 55 |
| YSA_04269 | YP_006386193.1 | general secretory pathway protein E | VFG2426 | Protein | 3e-70 | 48 |
| YSA_04269 | YP_006386193.1 | general secretory pathway protein E | VFG0112 | Protein | 2e-78 | 44 |
