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Name : YSA_04268 (YSA_04268) Accession : YP_006386192.1 Strain : Pseudomonas putida ND6 Genome accession: NC_017986 Putative virulence/resistance : Virulence Product : general secretion pathway protein F Function : - COG functional category : - COG ID : - EC number : - Position : 2309534 - 2310739 bp Length : 1206 bp Strand : - Note : - DNA sequence : ATGCCGATGTTCCGCTACCAGGCCCAGGATGCGCAGGGGGCGCGCCAGCGAGGAACGCTGGAGGCATCGGGGGCGCGTCA GGCCCGGCAAACCTTGCGCGAGCAAGGCTTGCTGGTGCTGAAGCTGGCCCCCGTAGGGACATCGCCAATGGCCGGCTGGC GCACAGGTAAAGGCATGAGCCTGGCCCAACGCTCGTTGCTGACCCGCCAGTTGGCGACGCTGCTGCATGCCGGGGTGCCG TTGATCGAGGCCTTGCAGGCAGTCGCCGGCCAGAGCACCCAGCGCCAGGTACGGCTGGTGCTGGGAGGTGTTGTTGAGCG GGTTGCCGAAGGCCTCGCCCTGGCCCAGGCTCTTGCGCACTACCCTCAGGCGTTCCCCATGGTTTACCGGGCCACCGTGG CCGCCGCCGAACGCTCCGGCCACCTGGCGGGCGTACTCGAGCGCTTGGCCGAGCATGGCGAGAACCAGCAGGCCCTGCGC CAGAAAGTACAGCTGGCCATGGTTTACCCGGTGATCCTCCTGGTTGTTTCGTTACTGGTGGTGGGGTTTCTGCTCGGTTA TGTGGTGCCCGATGTGGTGCAAGCCTTTTCGCGCGACCAGGCGCAGCTGCCGCTGGCAACGCAAGTGCTGATCGCCATGA GCGATGCCACCCAACATTACGGCTTGGCAGCGCTGGCGCTGTTGGTGGTAGCCGCTGCGCTGTTTGCCTGGGCACTTCGC CAGCCCGCACTGCGCAGGCAATGGCATGGCTTTTCACTGCGCCTGCCGGGCTATGGCGAGTTTGTCCGCGCCAGTGAAGC GGCACGGTTCATCAGTACCTTGGCCATCCTGGGGCGCAGCGGGGTAGCCCTGGTCGAGGCAATGAACATCGGCGCAGCGG TGATCGGCAACCAGATCCTGCGCGAGCGTTTGCTGCAGGCCGCCCGCGAGCTGGGCGAGGGCAGCTCGCTGGCCAATTGC CTGGCACGCAGCGACACCTTGCCGCCGCTGATGCTGCACATGATCGCCAGTGGCGAACGCGCCGGTGAGCTGGACACCAT GCTTGAACGTGCCGCAGACCTTCAGGCCAAGCAACTGGCGGGGCGCATCTCGTTGCTGGTGAGCCTGTGCGAGCCCCTGA TGTTGCTGGTGATGGGCGGCATCGTGCTGTTCATCGTGCTCGCCATCCTGCTGCCGATTCTCAACCTCAACCAACTGGTC AACTGA Protein sequence : MPMFRYQAQDAQGARQRGTLEASGARQARQTLREQGLLVLKLAPVGTSPMAGWRTGKGMSLAQRSLLTRQLATLLHAGVP LIEALQAVAGQSTQRQVRLVLGGVVERVAEGLALAQALAHYPQAFPMVYRATVAAAERSGHLAGVLERLAEHGENQQALR QKVQLAMVYPVILLVVSLLVVGFLLGYVVPDVVQAFSRDQAQLPLATQVLIAMSDATQHYGLAALALLVVAAALFAWALR QPALRRQWHGFSLRLPGYGEFVRASEAARFISTLAILGRSGVALVEAMNIGAAVIGNQILRERLLQAARELGEGSSLANC LARSDTLPPLMLHMIASGERAGELDTMLERAADLQAKQLAGRISLLVSLCEPLMLLVMGGIVLFIVLAILLPILNLNQLV N |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspF | YP_854405.1 | type II secretion protein GspF | Not tested | PAI I APEC-O1 | Protein | 3e-41 | 42 |
| gspF | CAE85232.1 | GspF, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 3e-41 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| YSA_04268 | YP_006386192.1 | general secretion pathway protein F | VFG0181 | Protein | 2e-63 | 52 |
| YSA_04268 | YP_006386192.1 | general secretion pathway protein F | VFG2049 | Protein | 2e-37 | 41 |
