Gene Information

Name : YSA_04266 (YSA_04266)
Accession : YP_006386191.1
Strain : Pseudomonas putida ND6
Genome accession: NC_017986
Putative virulence/resistance : Virulence
Product : general secretion pathway protein G
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2309086 - 2309532 bp
Length : 447 bp
Strand : -
Note : -

DNA sequence :
ATGTCCAAACGTTCAGCACGCCGCGCGCAACGCGGCTTCACCCTCATCGAAATCATGGTGGTGGTGATCATTCTTGGAGT
GCTTGGTGCGCTGGTGCTGCCCAACGTGATGAGCCGTCCTGACCATGCCAAGCTGACTGCAGCCCGCACCGATATCCAGT
CGATCTCTACCGCGTTGGAAATCTACCGTCTGGATAACGGCCGCTACCCGACCACCTCGCAAGGCCTGGAAGCCTTGGTG
ACGCGACCAACCGTAGCGCCACTCCCGCGTCAATGGAGTGCCCAAGGCTACCTCAAGAGTACACCCATCGACCCCTGGGG
CTCGCCTTACCGGTTTGCAAGCCCAGGCACCCGTTCGGCCCAAGGCTATGACCTTTACTCCCTGGGGGCCGATGGTCAGC
CGGGTGGTGAGGAGATGGATGCCGATATCGGTAACTGGCCTGAATGA

Protein sequence :
MSKRSARRAQRGFTLIEIMVVVIILGVLGALVLPNVMSRPDHAKLTAARTDIQSISTALEIYRLDNGRYPTTSQGLEALV
TRPTVAPLPRQWSAQGYLKSTPIDPWGSPYRFASPGTRSAQGYDLYSLGADGQPGGEEMDADIGNWPE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
gspG YP_854404.1 type II secretion protein GspG Not tested PAI I APEC-O1 Protein 1e-22 50
gspG CAE85231.1 GspG, hypothetical type II secretion protein Not tested PAI V 536 Protein 9e-23 50

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
YSA_04266 YP_006386191.1 general secretion pathway protein G VFG0180 Protein 1e-33 62
YSA_04266 YP_006386191.1 general secretion pathway protein G VFG1871 Protein 5e-25 52
YSA_04266 YP_006386191.1 general secretion pathway protein G VFG2050 Protein 3e-23 50