Gene Information

Name : YSA_03592 (YSA_03592)
Accession : YP_006385820.1
Strain : Pseudomonas putida ND6
Genome accession: NC_017986
Putative virulence/resistance : Virulence
Product : transcriptional regulator-like protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1930096 - 1930971 bp
Length : 876 bp
Strand : +
Note : -

DNA sequence : 
ATGAAACGCAAGCAATCCATCGAGCAGGTACGCTGGGACCTGGCACTTCGCTATCGCTTGATCGAGACCGTTGCCTGGTG
GGAAGGCCGGCTGACCACGGGGCACCTGATGCAGAGCTTTGGCATCAGCCGTCAGCAGGCGTCGAAGGACATCAACACCT
ACATCACCGAACATGCGCCCGAAAACTTGACGTATGACAAGCAGATCAAGGGCTATGTACCGAGCGAGCAGTTCGAGCCA
CGGTTCATCGACAACAGCGCAAGCGCCTATCTGCACCTGCTGTACCAGAACAATGAGCGCGCCCCGCACATCGACGGGCT
GGCACTGGCCTATGCACACACCCGGGTGCTGGAAGTACCCGATCGCCCAATCCGGCCAGAGGTGCTGCGCCCCTTGCTCA
AAGCCTGCCGTGAAGGCCTGCGCCTGGAAACCGAATACGTGTCCTTCAACACCCCCAACGTCGAGGTACGCCTGATCGCC
CCGCACACGCTGGTGTACACCGGCATGCGCTGGCACGTGCGGGCTTATTGCGAAAAGAACAGCCAGTACCGCGACTTCGT
GCTGAGCCGCTTGCGCGGGCAGCCGGACTTGCTCGACGCATCGCCGAACACGCGTGAGCAGGATGAAGACTGGAATGTGG
AAGTGCCCGTCATCTTCGAACCTGATGGGCGGTTGAACGCGGCGCAGAAGGCAATCATCGAAACCGACTTCGGCATGACG
GATGGGCAATTGGTGGTACCCAGCCGCAGGGCGTTGGTGAAGTATGTGTTGCAGCGGTATCAGATCGACCACCGCAACAT
GGCGATACTGCCCGAGGCCCAGCAACTGGTGGTGAGCAACCTCCAGGAACTGCAGCCGTGGTTGATGAAGTACTGA

Protein sequence : 
MKRKQSIEQVRWDLALRYRLIETVAWWEGRLTTGHLMQSFGISRQQASKDINTYITEHAPENLTYDKQIKGYVPSEQFEP
RFIDNSASAYLHLLYQNNERAPHIDGLALAYAHTRVLEVPDRPIRPEVLRPLLKACREGLRLETEYVSFNTPNVEVRLIA
PHTLVYTGMRWHVRAYCEKNSQYRDFVLSRLRGQPDLLDASPNTREQDEDWNVEVPVIFEPDGRLNAAQKAIIETDFGMT
DGQLVVPSRRALVKYVLQRYQIDHRNMAILPEAQQLVVSNLQELQPWLMKY

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC1772 NP_231407.1 hypothetical protein Not tested VPI-2 Protein 2e-67 48
VC0395_A1370 YP_001217313.1 hypothetical protein Not tested VPI-2 Protein 2e-67 48
VPI2_0020 ACA01837.1 hypothetical protein Not tested VPI-2 Protein 2e-66 48

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
YSA_03592 YP_006385820.1 transcriptional regulator-like protein VFG1105 Protein 9e-68 48