|
Name : YSA_03489 (YSA_03489) Accession : YP_006385769.1 Strain : Pseudomonas putida ND6 Genome accession: NC_017986 Putative virulence/resistance : Unknown Product : transposase IS4 family protein Function : - COG functional category : - COG ID : - EC number : - Position : 1883864 - 1884844 bp Length : 981 bp Strand : + Note : - DNA sequence : ATGAGCCAGATGAGCTTTTCCGACTTTGAGTACGCCGGCAAGCGCAAGCAGACCCGCCGAGAGCGCTTCCTCGCCGAAAT GGATCAGGTGGTGCCCTGGGCAGGCCTGCTGGAGCTGATCGAACCGTTCTACCCCAAGGCCGGCGGCGGTAGAAAACCCT ATCCTCTGGAAACCATGCTGCGCATCCATCTGTTGCAGAACTGGTTCTCCCTGAGCGACCCGGCCATGGAAGAAGCGCTC TACGAAATCACGCCCATGCGCCAGTTCGCACTCCTGACGCTGAGCGCGCCAATCCCCGAAGACACCACGATCATGAACTT CCGGCACTTGCTGGAGAAGCATCAGCTCGCACCGGCAATCCTTGCGGTCATCAATGGTTATCTGCAGGAAAAAGGCCTGT CGCTGCGCCAAGGCACCATCGTCGATGCCACCATTATTCATGCCCCCAGCTCGACCAAAAATAAAGAAGGCAAGCGTGAT CCCGAGATGCACCAGACCAAGAAAGGCGGTCAGTATTTCTTCGGGATGAAGGCGCACATCGGTGCCGATGTCGAGTCCGG CCTGGTGCATCACGTCCATGGCACCGCTGCCAATGTGGCCGATGTCACGCAGGTGGCTGAACTGCTGCATGGCGAAGAAA ACGCCGTGTATGCAGATGCCGGTTACACCGGTGTCGAAAGGCGCGAAGAGCATGAAAATCGGGGGGTGATCTGGCAGATT GCAGCGCGTCGCAGCACCTATTCCAAGCTGAACCAGCGCAGCGTACTGTACAAAGCCAAGCGCAAGATCGAGTTCTGCAA GGCTCAGACACGGGCCAAGGTCGAGCATCCGTTTCGCGTGATCAAGCGGCAGTTTGGTTACGTGAAAGTACGTTTTCGTG GGCTGATGAAAAACACGGCTCAGTTGACCACGCTGTTCGCCCTGGCAAACCTGTGGAGGGTTCGAAAACAGCTCATGGGT ATGGGTGAGGTTCGCGTTTAA Protein sequence : MSQMSFSDFEYAGKRKQTRRERFLAEMDQVVPWAGLLELIEPFYPKAGGGRKPYPLETMLRIHLLQNWFSLSDPAMEEAL YEITPMRQFALLTLSAPIPEDTTIMNFRHLLEKHQLAPAILAVINGYLQEKGLSLRQGTIVDATIIHAPSSTKNKEGKRD PEMHQTKKGGQYFFGMKAHIGADVESGLVHHVHGTAANVADVTQVAELLHGEENAVYADAGYTGVERREEHENRGVIWQI AARRSTYSKLNQRSVLYKAKRKIEFCKAQTRAKVEHPFRVIKRQFGYVKVRFRGLMKNTAQLTTLFALANLWRVRKQLMG MGEVRV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| tnp-33 | AAN62255.1 | transposase | Not tested | PAGI-3(SG) | Protein | 2e-121 | 77 |
| PSPTO_1407 | YP_003355052.1 | ISPssy transposase or derivative | Not tested | Hrp PAI | Protein | 9e-95 | 72 |
| tnpA | AAF71487.1 | TnpA | Not tested | Hrp PAI | Protein | 7e-95 | 72 |
| unnamed | AAO33449.1 | putative transposase | Not tested | Not named | Protein | 3e-67 | 60 |
| tnpA | ACF06175.1 | putative transposase | Not tested | Tn5036-like | Protein | 5e-70 | 52 |
| tnpA | ACF06178.1 | putative transposase | Not tested | Tn5036-like | Protein | 5e-70 | 52 |
