Gene Information

Name : YSA_03464 (YSA_03464)
Accession : YP_006385755.1
Strain : Pseudomonas putida ND6
Genome accession: NC_017986
Putative virulence/resistance : Virulence
Product : putative DNA invertase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1875753 - 1876328 bp
Length : 576 bp
Strand : -
Note : -

DNA sequence :
ATGGGAAAGCGGATTGGGTATGCCCGAGTGTCGACTGATGATCAGAACCTCGACCTGCAGCGAGATGCACTTGCTCTGGC
TGGGTGCTCAACAGTCTACGAGGAGACCATGAGCGGCAAGTCGGCGGACAGGCCGGAGCTTGGGCATTGCCTAAAAGCTC
TGCGTAGTGGTGACACTCTGGTTGTCTGGCGACTGGACCGCCTCGGTCGTTCTCTGCCTGACTTGGTTGGGATTGTCAGT
AGCTTGGAGCGGGAAGGGGTGGCCTTCGAATCCATGACCGAACGAATCGAAACCACCAGCGCTGCCGGTAAGCTGATCTT
TCACGTGTTCGCTGCCCTGGCGGAGTTCGAGCGCAACCTCATTCGAGAGCGAACTCGTGCAGGGCTGGCTGCGGCTCGTG
CCCGTGGGAGAAACGGTGGACGCAAGCCTGCGCTGGATGATCGTCAGGTACGTGCGATACGAGCTCTTCTCAGAGATCCT
GAGATACAGGTAACCGATGTTGCCCGACGGTATGGCGTTTCTCGAACAACGCTTTACCGCTACGTCGGTTCGCAGAAATC
ATCTGCGGTCGTTTAA

Protein sequence :
MGKRIGYARVSTDDQNLDLQRDALALAGCSTVYEETMSGKSADRPELGHCLKALRSGDTLVVWRLDRLGRSLPDLVGIVS
SLEREGVAFESMTERIETTSAAGKLIFHVFAALAEFERNLIRERTRAGLAAARARGRNGGRKPALDDRQVRAIRALLRDP
EIQVTDVARRYGVSRTTLYRYVGSQKSSAVV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
res AGK06929.1 resolvase Not tested SGI1 Protein 7e-52 71
res AGK06966.1 resolvase Not tested SGI1 Protein 7e-52 71
res AGK07012.1 resolvase Not tested SGI1 Protein 7e-52 71
res AAK02044.1 resolvase Not tested SGI1 Protein 7e-52 71
res AGK07070.1 resolvase Not tested SGI1 Protein 7e-52 71
tnpR ACD85600.1 TnpR resolvase Not tested SGI2 Protein 7e-52 71
res AGF34985.1 resolvase Not tested SGI1 Protein 7e-52 71
res AGF35025.1 resolvase Not tested SGI1 Protein 7e-52 71
res AGF35059.1 resolvase Not tested SGI1 Protein 7e-52 71
1_318 CAJ77076.1 Resolvase Not tested AbaR1 Protein 3e-32 54
ABTW07_3871 YP_005797119.1 resolvase IS26 Not tested AbaR4e Protein 5e-32 54
tnpR ACN81015.1 TnpR resolvase Not tested AbaR5 Protein 5e-32 54
CDBH8_0918 YP_005160010.1 transposase-like protein Not tested Not named Protein 3e-27 52
binR YP_254224.1 resolvase/integrase BinR Not tested ¥ðSh1 Protein 1e-31 50
SH1761 YP_253676.1 DNA-invertase Not tested ¥ÕSh1 Protein 2e-31 50
binL YP_254524.1 DNA-invertase Not tested ¥ðSh2 Protein 2e-31 50
tnpR ACF06154.1 resolvase Not tested Tn5036-like Protein 3e-17 43
tnpR ACY75537.1 TnpR Not tested Tn6060 Protein 6e-17 42
tnpR AAL08439.1 resolvase TnpR Not tested SRL Protein 9e-17 41
tnpR AFV53121.1 Tn21 resolvase Not tested AbGRI2-1 Protein 9e-17 41
tnpR YP_006098373.1 transposon Tn21 resolvase Not tested Tn2411 Protein 1e-16 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
YSA_03464 YP_006385755.1 putative DNA invertase VFG1030 Protein 4e-17 41