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Name : YSA_00348 (YSA_00348) Accession : YP_006384079.1 Strain : Pseudomonas putida ND6 Genome accession: NC_017986 Putative virulence/resistance : Unknown Product : Rhs element Vgr protein Function : - COG functional category : - COG ID : - EC number : - Position : 185326 - 187494 bp Length : 2169 bp Strand : + Note : - DNA sequence : ATGCCTAGCCAATCTGATTTACGCTACAGCTTTGAACCACTCGTGGGCAAGACTGAGTTCGAAGTGGTGTCGTTCGAACT ACGAGAAGGGATCAGCACACCCTTCGAACTGGAGCTGAAATTGATCAGCTTCGAGAACGATATCGACTTCGGCCACCTGC TCGACAAACCGGTGCTCTTCACCATCTGGGAAGGCGGACGCCCAGTACGCTACGTGCACGGTCTGGTCAGTCGTTTCAGC CAAGCGGAAAGTGGCTTCTACCGCACCTACTATGACGCGCTGATCGAGCCACAGCTGGCCCGTGCCAGCCTGCGTTCGAA CTGGCGCATCTTCCAGCAGAAGACCGTGCCGCAAATTCTTGAACTGATGCTCAAGCGCCAGGGCATCGACCAGTACGCAC TACGCGCCAGCCTGGACCACCAGGTGCGCGAATTCTGCGTTCAGGCCGGCGAAACCGACCTCGACTTCATCGCCCGCCTG GCGGCCGAAGAAGGCTTTGTCTACCGCTTCGAGCACAATGAAAAACGCCATAAGCTGATCATCACCGACAGACTGCAGTC ACTCGGTCTGATAAGTCACGGTGTCATCAAACACGAGGACGACGCCGAAGGCTTCTACCGTGAGCGTGAACCGTCAGCCC CAGACACCGTGCTGTACCATTCCAACCACGGCGGCGACCAGCCTCAACCGTGCCTACGGCGCTTGCGCTACAGCGAACAG GTGCGTACTGCACGGCAGGTTCAACGCGACTACACCTTCACCCACCCGGCCTATCGTCAGGAACACAGGGCCTCGGGCCC GTATCTTGAGCACCAGTCCACGGACTATGAGTGCTTCGACTACCCCGGCCGTTACAAACGCGATGCCGTTGGCAAGCCGT TCACCGAAAACCGCATCACCGGCTTGCGCCATGACGTGCGTATTGCCCAAGTGCAAGGCGACGATGTGCGCTTGCAACCA GGCCTGAGCTTCACCCTGACAGGCCACCCGCGCGAAGACCTGAATGTGCATTGGCGGGTCAGCACGGTTCGCCACGAAGG CAGCCAGTTCACCAGCCTGCAGGAAGAAGCTGCCGGGGCCGACCAGGGCACACGTTACGAGCAAAAGGCGGTACTGGTGC CAGGCAGAGCCGAGTGGCGCCCAGCCCCGTTGCCCAAACCACGCGTTGACGGCCCGCACATGGCCACCGTGGTGGGGCCG CCCGGTGAAGAGATCTACTGCGACGAATGGGGCCGGGTCAAGGTCAGCTTCCCCTGGGACAGAGAAAGCCAGGACAACGC GTTCAGTTCCTGCTGGGTACGCGTATCCCAAGGCTGGGCCGGCGGCAGCTGGGGCTCGATGGCCATCCCACGGATTGGCC AGGACGTGATCATCCACTACGTCAACGGCGACCCCGACCAGCCGATGATCACCGGCCGTACTTACTGCGGTAACCAGCTG CCACCGTACGACCTTCCCCGTCACAAGACCCGCATGACCATCAAGAGCCAGACCCACAAGGGCGATGGCTTCAACGAGCT GCGCTTCGAGGACGAACTGGGCCAGGAGGAAGTGTTCATTCATGCCCAGAGGGACCAGAACAATGTGGTCAAGCACGATG AGACTACGCAGGTCGGCAATGACCGCAAAGAGCAGGTCGATCACGACGAATCGATCCTGATCGGCCACGACCGTACGGAA ACGGTTGGCAATGACGAGCACATCACCATCGGGCAGGACGCCGCGCTCGACATCGGCAGAAACCACACGATCAGGATCGC CAAGGACCGTGTCGAAAACATCGGCAATCACCGTCACGACCAGATCGCCGCCAATCACCACACCCGTATCGGTGGCAACT TCGAACAACGGGTCGAAGGGCATGCCGAGCTGGAAGCCCGTGGGGATATCCGCAGACGTACTCGCCGTTATGAACTTCGA GCCTCGGAAGCCGTGGTCATCCAAGGCCCTGGTGGCTCCATTCGAATCGACGAAACGGGCATCACCCTGGACAGCCCGAC GATTCGCATCACCGGCCAGATGCTCAAGTCGGCAAATGGGACGACAAGCCCCTTTTCCATCAGCAGTGCACCGAACACCG GCAAGCCTCTGGAGCGCTTGTGTGGGCGCCGCCCTGATGGTACCTGCCCCCTGCCCGATTGCCGCTGTATCCGAGGGCCA GGCCAATGA Protein sequence : MPSQSDLRYSFEPLVGKTEFEVVSFELREGISTPFELELKLISFENDIDFGHLLDKPVLFTIWEGGRPVRYVHGLVSRFS QAESGFYRTYYDALIEPQLARASLRSNWRIFQQKTVPQILELMLKRQGIDQYALRASLDHQVREFCVQAGETDLDFIARL AAEEGFVYRFEHNEKRHKLIITDRLQSLGLISHGVIKHEDDAEGFYREREPSAPDTVLYHSNHGGDQPQPCLRRLRYSEQ VRTARQVQRDYTFTHPAYRQEHRASGPYLEHQSTDYECFDYPGRYKRDAVGKPFTENRITGLRHDVRIAQVQGDDVRLQP GLSFTLTGHPREDLNVHWRVSTVRHEGSQFTSLQEEAAGADQGTRYEQKAVLVPGRAEWRPAPLPKPRVDGPHMATVVGP PGEEIYCDEWGRVKVSFPWDRESQDNAFSSCWVRVSQGWAGGSWGSMAIPRIGQDVIIHYVNGDPDQPMITGRTYCGNQL PPYDLPRHKTRMTIKSQTHKGDGFNELRFEDELGQEEVFIHAQRDQNNVVKHDETTQVGNDRKEQVDHDESILIGHDRTE TVGNDEHITIGQDAALDIGRNHTIRIAKDRVENIGNHRHDQIAANHHTRIGGNFEQRVEGHAELEARGDIRRRTRRYELR ASEAVVIQGPGGSIRIDETGITLDSPTIRITGQMLKSANGTTSPFSISSAPNTGKPLERLCGRRPDGTCPLPDCRCIRGP GQ |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| vgrG | AAN64196.1 | VgrG | Not tested | macrophage toxin pathogenicity island | Protein | 1e-106 | 42 |
