Gene Information

Name : YSA_03044 (YSA_03044)
Accession : YP_006385534.1
Strain : Pseudomonas putida ND6
Genome accession: NC_017986
Putative virulence/resistance : Resistance
Product : methionine gamma-lyase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1647298 - 1648401 bp
Length : 1104 bp
Strand : -
Note : -

DNA sequence :
GTGTATCAAACGGCTACCTATGCCTTTCCCACTGTCGAGTACGGTGCTGCCTGCTTCGCCGGGGAGGAGCCTGGGCATTT
CTACAGCCGCATTTCCAACCCCACGCTGGCCTTGCTGGAGCAGCGCATGGCTTCGCTGGAGGGCGGTGAAGCGGGGTTGG
CGTTGGCCTCGGGGATGGGCGCGATTACCTCAACCCTCTGGACCCTGCTAAGGCCTGGCGATGAGCTGATTGTCGGGCGC
ACCTTGTATGGCTGTACCTTCGCTTTTCTGCACCACGGTATTGGTGAGTTCGGGGTGAAAGTTCGCCATGTCGATCTCAA
CGATCTCAAGGCCCTGAAAGCGGCGATCAGCAGCAAAACACGGATGATCTACTTCGAAACACCGGCCAACCCCAACATGC
AACTTGTGGATATTGCGGCGGTTGTGGAGGCGGTGCGGGGGCATGATGTGCATGTGGTGGTCGATAACACCTACTGTACG
CCGTACCTGCAGCGGCCACTGGAGCTGGGGGCGGACCTGGTGGTGCACTCGGCAACCAAGTACCTCAGTGGGCATGGCGA
TATCACTGCCGGGTTGGTGGTGGGGTGCAAGGCGTTGGTCGACCGTATCCGCCTGGAAGGGCTGAAGGATATGACCGGCG
CGGTGCTGTCACCGCATGACGCGGCGTTGCTGATGCGCGGTATCAAGACCCTGGCCCTGCGCATGGACCGGCATTGCGCC
AATGCCCAGCAGGTGGCCGAGTTTCTCGCTCGGCAGCCGCAGGTGGAATTGATTCATTACCCGGGGCTACCGTCTTTTGC
CCAGTACGCGTTGGCCCAGCGACAGATGCGTTTGCCTGGCGGGATGATTGCGTTTGAGCTCAAGGGTGGCATTGAGGCGG
GGCGGCGCTTCATGAATGCGCTGCAGCTCTTTGCCCGGGCGGTGAGCCTGGGGGATGCCGAGTCGCTGGCGCAGCATCCG
GCGAGCATGACGCATTCCAGCTATACGCCGCAGGAGCGGGCGCATCACGGGATATCGGAGGGGTTGGTGCGTCTGTCGGT
GGGGCTGGAGGATGTGGAGGACCTGCTGGCAGATGTCGAACAGGCATTGCAGGCCTGCTGCTAG

Protein sequence :
MYQTATYAFPTVEYGAACFAGEEPGHFYSRISNPTLALLEQRMASLEGGEAGLALASGMGAITSTLWTLLRPGDELIVGR
TLYGCTFAFLHHGIGEFGVKVRHVDLNDLKALKAAISSKTRMIYFETPANPNMQLVDIAAVVEAVRGHDVHVVVDNTYCT
PYLQRPLELGADLVVHSATKYLSGHGDITAGLVVGCKALVDRIRLEGLKDMTGAVLSPHDAALLMRGIKTLALRMDRHCA
NAQQVAEFLARQPQVELIHYPGLPSFAQYALAQRQMRLPGGMIAFELKGGIEAGRRFMNALQLFARAVSLGDAESLAQHP
ASMTHSSYTPQERAHHGISEGLVRLSVGLEDVEDLLADVEQALQACC

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
metB YP_281510.1 cystathionine beta-lyase Not tested Not named Protein 1e-48 41
SAR0460 YP_039909.1 Cys/Met metabolism PLP-dependent enzyme Not tested vSa¥á Protein 2e-48 41
SAS0418 YP_042545.1 Cys/Met metabolism PLP-dependent enzyme Not tested vSa¥á Protein 1e-49 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
YSA_03044 YP_006385534.1 methionine gamma-lyase BAC0207 Protein 7e-143 85