Gene Information

Name : YSA_00331 (YSA_00331)
Accession : YP_006384069.1
Strain : Pseudomonas putida ND6
Genome accession: NC_017986
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 176333 - 177823 bp
Length : 1491 bp
Strand : +
Note : -

DNA sequence :
ATGCCCAAGCCAAGCAGCACCGCCATCACCACAGACGCAACGGCCGACACATTGAGCAATGCCACCCTGCTCGACCAGAT
CATGGCAGAAACCAAACTGGTACCTGCCCAAGAGGGCTACCAGATTGCCAGGCAGGGCGTATCTGCCTTCATCACCGAAA
TACTCAAAAGCAATGACCCAGATCAACTGATCAACAAGCACCGAGCCGACCAGATGATTGCCGAGATCGACCGAATGCTC
GGCAATCAGATGGATGCCATTCTGCATCAGCCTGAGTTCCAGCAGCTTGAATCATCATGGCGCAGCCTTAAACTTCTGGT
GGACCGCACGGACTTCAGGGAGAACATCAAGCTTGAAGTCTTGCATGTCAGTAAAGAGGACCTGCTCGACGACTTCGAAA
ATGCTGCTGACATTACCTGCAGCGGTATCTACAAGCATGTTTACACCGCGGGTTATGGCCAATTCGGGGGAGAGCCGGTT
GCGGCCATGGTAGGCAACTACAACTTCGGCCCCTCTTCCCCTGACATCAAGTTGCTAAGTTACATGGCCTCCGTTGGCGC
CATGTCCCATGCCCCTTTTCTTGCTGCACCTGCCCCCGAATTCTTCAATTTGAACAGCTTCGAGGAGCTGCCTAACCTCA
AGGAAATAAAAGACCTCTTCGCCGGCCCTCGGCATGCCAAGTGGCGCGCTTTTCGTGAAAGCGAAGACGCCCGCCACGTC
GCCCTGACCGGGCCGCGCTTCATGCTTCGCTCCGCTTACCACCCGCAGGAACAACCGATCGAGAGCTTCAACTACAACGA
AGACATCGCCGGGCAGCACGACAACTACCTGTGGGGCAATTCTGCTTTTCTGTTAGCCAGTTGCATCAACGACAGCTTCG
CCCGCTACCGCTGGTGCCCGAACATCATCGGCCCCCAATCCGGCGGTGCTGTCGAAGACTTGCCGGTCCACCTGTACGAA
TCCCTGGGCCAGTTGCAGGCCAAGATTCCTACCGAGGTGCTGATATCCGACCGCAAGGAATTCGAACTGGCCGAAGAGGG
CTTCATCGCCCTGACCATGCGCAAAGACAGCGACAACGCCGCGTTCTTCTCCGCCAACTCGGTACAAAAGCCCAAGCACT
TCCCGAAAACCCCCGAGGGGCTTCAGGCACAGACCAACTACAAGCTGGGTACCCAGTTGCCCTACCTGTTCATCGTCAAC
CGGCTCGCCCACTACATCAAGGTGCTGCAGCGCGAGCAGATCGGCAGTTGGAAAGAGCGCCGTGACCTTGAGTCCGAGCT
GAACAAATGGATCAAGCAGTACGTCGCCGACCAGGAGAACCCGTCTGCCGACGTTCGCAGCCGCCGGCCGCTGCGTGCCG
CCCGTATTGAGGTCTCGGATGTTGCGGGTGACCCAGGCTGGTACCAGGTTTCGCTCGCCGTACGTCCGCACTTCAAGTAC
ATGGGCGCGAACTTCGAGATTTCCCTGGTCGGGCGGCTCGATACGCAATGA

Protein sequence :
MPKPSSTAITTDATADTLSNATLLDQIMAETKLVPAQEGYQIARQGVSAFITEILKSNDPDQLINKHRADQMIAEIDRML
GNQMDAILHQPEFQQLESSWRSLKLLVDRTDFRENIKLEVLHVSKEDLLDDFENAADITCSGIYKHVYTAGYGQFGGEPV
AAMVGNYNFGPSSPDIKLLSYMASVGAMSHAPFLAAPAPEFFNLNSFEELPNLKEIKDLFAGPRHAKWRAFRESEDARHV
ALTGPRFMLRSAYHPQEQPIESFNYNEDIAGQHDNYLWGNSAFLLASCINDSFARYRWCPNIIGPQSGGAVEDLPVHLYE
SLGQLQAKIPTEVLISDRKEFELAEEGFIALTMRKDSDNAAFFSANSVQKPKHFPKTPEGLQAQTNYKLGTQLPYLFIVN
RLAHYIKVLQREQIGSWKERRDLESELNKWIKQYVADQENPSADVRSRRPLRAARIEVSDVAGDPGWYQVSLAVRPHFKY
MGANFEISLVGRLDTQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
aec18 YP_851426.1 hypothetical protein Not tested PAI II APEC-O1 Protein 6e-163 66
aec18 AAQ96712.1 Aec18 Not tested AGI-1 Protein 5e-163 66
HH0247 NP_859778.1 hypothetical protein Not tested HHGI1 Protein 6e-146 56

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
YSA_00331 YP_006384069.1 hypothetical protein VFG2093 Protein 6e-174 69
YSA_00331 YP_006384069.1 hypothetical protein VFG2475 Protein 1e-152 61
YSA_00331 YP_006384069.1 hypothetical protein VFG2070 Protein 2e-78 41