Gene Information

Name : YSA_02993 (YSA_02993)
Accession : YP_006385506.1
Strain : Pseudomonas putida ND6
Genome accession: NC_017986
Putative virulence/resistance : Unknown
Product : UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1621832 - 1623184 bp
Length : 1353 bp
Strand : -
Note : -

DNA sequence :
ATGAGCGTGTCTTTGATCGCTTCCGACCAATTCCGCATCGTTGTCGGCCTCGGCAAGAGCGGCATGTCCCTGGTTCGCTT
CCTGGCGAGCCGGGGCATTGCCTTTGCGGTCGCCGATACCCGCGAGCAACCGCCGGAACTGGAAACCCTGCGCCGTGATT
ACCCGCAGGTGGAAGTGCGCTGTGGTGAACTGGACGTGGACTTCCTGTGCCGCGCCAACGAGTTGTACGTGAGCCCCGGT
CTGGCCTTGGCCACGCCGGCCTTGCAGCAGGCGGCCGCGCGTGGCGTGAAGCTGTCTGGCGACATAGAGCTGTTTGCTCG
CCATGCCAAGGCGCCGATCATTGCCATCAGCGGTTCCAACGCCAAGAGCACCGTCACGACGCTGGTCGGTGAAATGGCCG
CCAAGGCCGGCAAGCGAGTGGCCGTGGGCGGTAACCTCGGTACCCCGGCGCTCGACCTGCTGGCCGATGACATCGAGCTG
TACGTGCTGGAGCTTTCCAGCTTCCAGCTGGAAACCACTGACCAGCTCAACGCCGAAGTGGCGACTGTTCTGAACATCAG
CGAAGACCACATGGACCGCTATAGCGGCCTTCCGGCCTACCACCTGGCCAAGCACCGGATTTTCCGCGGTGCCCGCCAGG
TGGTGGTCAACCGCCAGGACGCCCTGAGCCGGCCGCTGCCGGTGGAAGGCCGACCATGCTGGACCTTCGGCCTCAACTCG
CCCGACTTCAAAGCGTTTGGCCTGCGTGAAGTGGACGGTGAAAAATACCTGGCGTTCGAGTTCCAGACGCTGATGCCGGC
GCGTGAACTGAAGGTTCGCGGTGCTCACAACCAGAGCAACGCCCTGGCGGCGCTGGCCCTGGGGCATGCTGCCGGCCTGC
CGTTCGAGCCCATGCTCGCGGCCCTGCGCGAGTTCGGTGGCCTGGCCCACCGGTGCCAGTGGGTACGCGAGCGTAATGGC
GTGAACTGGTACGACGATTCCAAGGCCACCAACGTCGGTGCTGCCCTGGCCGCCATCGAAGGCCTGGGCGCCGATATCGA
AGGCAAGTTGGTGCTGATCGCCGGTGGTGACGGCAAAGGTGCTGAATTCACTGCGCTGCGCGAGCCGGTCAAGCGTTTCT
GCCGCGCCGTGGTATTGCTCGGCCGTGATGCCGAGCGCCTGGCCGAGGCCTTGGGCGATGCCGTGCCACTGGTTCGGGTC
AAGACGCTTGACGATGCCGTACAGCAGTGTGCCGAACTGGCCCAGGCCGGCGATGCCGTGCTGCTGTCGCCAGCATGCGC
CAGCCTCGACATGTTCAAGAACTTCGAGGAACGGGGGCGTCTGTTCGCCCAGGCAGCGGGAGGTCTCGCATGA

Protein sequence :
MSVSLIASDQFRIVVGLGKSGMSLVRFLASRGIAFAVADTREQPPELETLRRDYPQVEVRCGELDVDFLCRANELYVSPG
LALATPALQQAAARGVKLSGDIELFARHAKAPIIAISGSNAKSTVTTLVGEMAAKAGKRVAVGGNLGTPALDLLADDIEL
YVLELSSFQLETTDQLNAEVATVLNISEDHMDRYSGLPAYHLAKHRIFRGARQVVVNRQDALSRPLPVEGRPCWTFGLNS
PDFKAFGLREVDGEKYLAFEFQTLMPARELKVRGAHNQSNALAALALGHAAGLPFEPMLAALREFGGLAHRCQWVRERNG
VNWYDDSKATNVGAALAAIEGLGADIEGKLVLIAGGDGKGAEFTALREPVKRFCRAVVLLGRDAERLAEALGDAVPLVRV
KTLDDAVQQCAELAQAGDAVLLSPACASLDMFKNFEERGRLFAQAAGGLA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00311 YP_008207776.1 UDP-N-acetylmuramoylalanine-D-glutamate ligase Not tested AbaR25 Protein 1e-83 53
BJAB0868_00315 YP_008211641.1 UDP-N-acetylmuramoylalanine-D-glutamate ligase Not tested AbaR26 Protein 1e-83 53