Gene Information

Name : YSA_02012 (YSA_02012)
Accession : YP_006384971.1
Strain : Pseudomonas putida ND6
Genome accession: NC_017986
Putative virulence/resistance : Unknown
Product : aminotransferase AlaT
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1081192 - 1082490 bp
Length : 1299 bp
Strand : +
Note : -

DNA sequence :
GTGCCAGGCGTTCAGTCTGGCACCCGCTTCCTGCCCTTTCAAACCTTTCGGCGGGGCGTAGCGCGTTTTCTCAATCGGGA
TCCCATCATGCAGTTCAGCAAATCGAACAAGCTCGCCAATGTCTGCTACGACATTCGCGGCCCAGTGCTCAAGCACGCCA
AACGCCTGGAGGAGGAAGGCCACCGCATCCTCAAGCTGAACATCGGCAACCCGGCGCCGTTTGGCTTCGAGGCGCCTGAT
GAAATCCTTCAGGATGTGATCCGCAACCTGCCCACCGCACAGGGCTACAGCGACTCCAAAGGCCTGTTCAGTGCCCGCAA
GGCGGTGATGCAGTACTGCCAGCAGAAAGAAATCGAAGGCGTCACCATCGAGGACATCTACCTGGGTAATGGTGTGTCCG
AGCTGATCGTCATGTCGATGCAGGCGCTGCTCAACAACGGCGACGAAGTGCTGATCCCGGCCCCCGACTACCCGCTGTGG
ACAGCCGCCGTGAGCCTGGCCGGCGGCAAGCCGGTGCACTACCTGTGCGACGAGCAGGCCGACTGGTTCCCTGACCTTGA
GGACATCAAGGCCAAGATCACCCCAAACACCAAGGCGCTGGTGATCATCAACCCGAACAACCCGACCGGCGCCGTCTACT
CCAAAGAGCTGCTGCTGGGCATGCTGGAGCTGGCGCGCCAGCACAACCTGGTGGTGTTCTCCGACGAGATCTACGACAAG
ATCCTGTACGACGAAGCTGTGCACATCAGCACCGCCTCGCTGGCCCCGGACCTGCTGTGCCTGACCTTCAACGGCTTGTC
CAAGTCATACCGGGTGGCGGGCTTCCGCTCTGGCTGGCTGATCATTTCCGGGCCCAAGCACCACGCACACAGCTACATCG
AAGGCATCGACATGCTGGCCAACATGCGCCTGTGCGCCAACGTGCCGGCCCAGCATGCCATCCAGACCGCGCTGGGCGGC
TACCAGAGCATCAACGACCTGGTGCTGCCACCGGGGCGCCTGCTGGAGCAGCGCAACCGCACCTACGAACTGCTCAACGA
CATCCCCGGCGTCAGCTGCGTGAAGCCGATGGGCGCGCTGTATGCATTCCCGCGGATCGACCCGAAGGTTTGCCCGATCC
TCAACGACGAGAAGTTCGCCCTTGACCTGTTGCTGTCGGAGAAGCTGCTGATCGTACAAGGAACGGCGTTCAACTGGCCG
TGGCCGGACCACTTCCGCGTGGTGACCTTGCCGCGGGTGGACGACCTGGAAGCAGCCATTGGCCGGATCGGCAATTTCCT
GAAGGGTTATTCGCAGTAG

Protein sequence :
MPGVQSGTRFLPFQTFRRGVARFLNRDPIMQFSKSNKLANVCYDIRGPVLKHAKRLEEEGHRILKLNIGNPAPFGFEAPD
EILQDVIRNLPTAQGYSDSKGLFSARKAVMQYCQQKEIEGVTIEDIYLGNGVSELIVMSMQALLNNGDEVLIPAPDYPLW
TAAVSLAGGKPVHYLCDEQADWFPDLEDIKAKITPNTKALVIINPNNPTGAVYSKELLLGMLELARQHNLVVFSDEIYDK
ILYDEAVHISTASLAPDLLCLTFNGLSKSYRVAGFRSGWLIISGPKHHAHSYIEGIDMLANMRLCANVPAQHAIQTALGG
YQSINDLVLPPGRLLEQRNRTYELLNDIPGVSCVKPMGALYAFPRIDPKVCPILNDEKFALDLLLSEKLLIVQGTAFNWP
WPDHFRVVTLPRVDDLEAAIGRIGNFLKGYSQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
aspC YP_005684271.1 Aminotransferase AlaT Not tested PiCp 7 Protein 4e-128 65
aspC YP_003784329.1 aspartate aminotransferase Not tested PiCp 7 Protein 4e-128 65
aspC YP_005686363.1 Aminotransferase AlaT Not tested PiCp 7 Protein 4e-128 65
aspC YP_005682179.1 Aminotransferase AlaT Not tested PiCp 7 Protein 4e-128 65