Gene Information

Name : ompR (TMO_b0223)
Accession : YP_006381876.1
Strain :
Genome accession: NC_017966
Putative virulence/resistance : Virulence
Product : winged helix family two component transcriptional regulator
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 242068 - 242808 bp
Length : 741 bp
Strand : -
Note : -

DNA sequence : 
GTGACGAAGATGCAGCCAGCCGCCGGCCCCCGTATCCTGCCCCGGATCCTGATCGTCGAGGATGATGCCGGGATCGGCGG
GCTGCTGGCCCTGACCATGCAGGAAAGCGGCATGCAGGCGACGGTGGTTGGCGACGGCCGCGGCATGACCGCGGCCCTGA
GCCGGCAGGGTTTCGACCTGATCGTGCTGGACATCATGCTGCCCGACGAGGACGGCGTCAGCCTGTGTCGCAGGATACGG
GCGGAGATGACCATCCCGATCATCATGCTGACGGCGCTGGGCGAAGAAATCGACCGGATCGTCGGGCTTGAAGTGGGGGC
CGACGACTATGTCACCAAGCCGTTCAGCCCCAGGGAGCTGGTGGCCAGGATCCGCAGCCTGCTGCGCCGCGCCTCTTACG
GTGCAGCCCTGCCCGATGCCCGCCGCCGGCTGCGCTTCGACGGCTGGGAGATCGACCCGCTGCGCCGCCAGCTCCACGAC
CCCTCCCGTGCCCGCATCGCGCTGACCACTACGGAATTCGACCTGCTGCTCGCCTTCTGCCGCAATCCCGGCCGGGTGAT
CACGCGCGAAGAACTGCTGTCGCTGACCCATGCCGGTCTCGCCGGGCCGATCGAGCGCAGCATCGACGTGCACATCAGCC
GGCTGCGCCAGAAGATCGAAGCCGACCCGAAAGAACCCGCCCTGCTGCGCACGGTGCGCCTGGGCGGCTATGTCTTCACC
GCCGTGGTCGAAGAGATCTGA

Protein sequence : 
MTKMQPAAGPRILPRILIVEDDAGIGGLLALTMQESGMQATVVGDGRGMTAALSRQGFDLIVLDIMLPDEDGVSLCRRIR
AEMTIPIIMLTALGEEIDRIVGLEVGADDYVTKPFSPRELVARIRSLLRRASYGAALPDARRRLRFDGWEIDPLRRQLHD
PSRARIALTTTEFDLLLAFCRNPGRVITREELLSLTHAGLAGPIERSIDVHISRLRQKIEADPKEPALLRTVRLGGYVFT
AVVEEI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42044.1 hypothetical protein Not tested PAI II 536 Protein 6e-35 41
c3565 NP_755440.1 response regulator Not tested PAI I CFT073 Protein 5e-34 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ompR YP_006381876.1 winged helix family two component transcriptional regulator NC_008702.1.4607594. Protein 4e-49 47
ompR YP_006381876.1 winged helix family two component transcriptional regulator CP000034.1.gene3671. Protein 3e-41 44
ompR YP_006381876.1 winged helix family two component transcriptional regulator AE016830.1.gene1681. Protein 2e-35 42
ompR YP_006381876.1 winged helix family two component transcriptional regulator HE999704.1.gene2815. Protein 1e-34 42
ompR YP_006381876.1 winged helix family two component transcriptional regulator AE000516.2.gene3505. Protein 4e-30 41
ompR YP_006381876.1 winged helix family two component transcriptional regulator BAC0596 Protein 7e-33 41
ompR YP_006381876.1 winged helix family two component transcriptional regulator CP000034.1.gene2186. Protein 5e-34 41
ompR YP_006381876.1 winged helix family two component transcriptional regulator NC_002695.1.916589.p Protein 4e-34 41
ompR YP_006381876.1 winged helix family two component transcriptional regulator CP000647.1.gene2531. Protein 9e-35 41
ompR YP_006381876.1 winged helix family two component transcriptional regulator CP001138.1.gene2239. Protein 7e-33 41
ompR YP_006381876.1 winged helix family two component transcriptional regulator CP001918.1.gene3444. Protein 6e-34 41
ompR YP_006381876.1 winged helix family two component transcriptional regulator BAC0039 Protein 5e-34 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ompR YP_006381876.1 winged helix family two component transcriptional regulator VFG1563 Protein 3e-35 41
ompR YP_006381876.1 winged helix family two component transcriptional regulator VFG1702 Protein 2e-34 41