Gene Information

Name : TKWG_23425 (TKWG_23425)
Accession : YP_006381264.1
Strain : Advenella kashmirensis WT001
Genome accession: NC_017964
Putative virulence/resistance : Virulence
Product : capsule polysaccharide biosynthesis
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4030634 - 4031764 bp
Length : 1131 bp
Strand : +
Note : COG3562 Capsule polysaccharide export protein

DNA sequence : 
GTGATAATTGAAGGAATCGAAGCGTTCAGCGGCAAGAACATTTTGCTATTGCAAGGACCGGTGGGTCCTTTTTTTCGTCG
CTTTGCAACTGACCTTCGGCGCCAGGGTGCAACCGTGCACGCTATCAATTTCAACGGCGGCGATTGGCTCTTCAATGGTA
AGGATGCGATCAATTTTCGCAGCCATCCCCGGGAGTGGCGCAGTTTTTTTGAGAATCTGCTGAACGATCTGGATATTGAC
ATCGTCTTCCTGTTTGGCGATTGCCGCCCCATTCACGTTGTTGCCCACCAAATCGCAACCCAGTACGGCGTACAGATCGG
TGTTTTTGAAGAAGGCTACGTGCGGCCAAATTTCATCACACTTGAAAAAAACGGCGTGAATAACCATTCAAGCGCGGCCC
GGGAAGCACAATTTTATTTCAGCCAGAAGGCCATTCCAACACCCAGGGAAAAACAGGTGGGCTATGCCTTCCCCCAAATG
ATGACGTGGGCGTTCCTGTATTACGTCTGTAGTTTGCTGCTCAAGCCCTTCTTCTGGCACTATCGCCATCATCGGCGCTT
GCATATCATAGAAGGGTATATCTGGACCCGCAGTTTCCTGCGCAAGGCCTATTACCGTATCACAGAGCGGAATATGCAGA
AGAAGCTGACCACGACGCTCTCCAAACAGTATTTCCTGCTGCCGCTACAGGTCTATAACGATGCCCAGATTCATACCCAT
TCTGACTTTGCAACGGTAGAAACCTTTATCCGTCATGTGGTTACGTCGTTTTCCAAGCATGCGCCTTTGGGCACCCACCT
GGTGATCAAACACCACCCCATGGACCGCGGTTATAACGATTATTCCAACTGGCTGCAGCAACTGGAGTTTCTGTACGATT
TGTCCGGTCGCGTCCATTACATTCATGATCAGCATTTGCCTTCCTTACTGGATCACGCCATTGGTACTGTCGTGGTAAAT
AGTACCGTGGGTCTGTCCGCCTTGTTACACGGCTCTCCACTTAAGGTTTGCGGCCGTGCCATGTATGACTTCAAGGGACT
TACTTACCAGGGACCCTGGATGAGTTTTGGCGTGAGGCACAGGACGAGAAAGTGGACAGCAAGCTTTTTGACTCATTCCG
TAACTATCTGA

Protein sequence : 
MIIEGIEAFSGKNILLLQGPVGPFFRRFATDLRRQGATVHAINFNGGDWLFNGKDAINFRSHPREWRSFFENLLNDLDID
IVFLFGDCRPIHVVAHQIATQYGVQIGVFEEGYVRPNFITLEKNGVNNHSSAAREAQFYFSQKAIPTPREKQVGYAFPQM
MTWAFLYYVCSLLLKPFFWHYRHHRRLHIIEGYIWTRSFLRKAYYRITERNMQKKLTTTLSKQYFLLPLQVYNDAQIHTH
SDFATVETFIRHVVTSFSKHAPLGTHLVIKHHPMDRGYNDYSNWLQQLEFLYDLSGRVHYIHDQHLPSLLDHAIGTVVVN
STVGLSALLHGSPLKVCGRAMYDFKGLTYQGPWMSFGVRHRTRKWTASFLTHSVTI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
kpsS AAZ04471.1 capsule polysaccharide export protein Virulence PAI I APEC-O1 Protein 2e-58 43
kpsS YP_854344.1 polysialic acid capsule synthesis protein KpsS Not tested PAI I APEC-O1 Protein 3e-58 43
lipB NP_273146.1 capsule polysaccharide modification protein Not tested IHT-A Protein 2e-50 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
TKWG_23425 YP_006381264.1 capsule polysaccharide biosynthesis VFG0260 Protein 8e-51 41
TKWG_23425 YP_006381264.1 capsule polysaccharide biosynthesis VFG0705 Protein 2e-52 41
TKWG_23425 YP_006381264.1 capsule polysaccharide biosynthesis VFG0693 Protein 2e-52 41