Gene Information

Name : TKWG_23405 (TKWG_23405)
Accession : YP_006381260.1
Strain : Advenella kashmirensis WT001
Genome accession: NC_017964
Putative virulence/resistance : Virulence
Product : polysaccharide ABC transporter ATP-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4026602 - 4027261 bp
Length : 660 bp
Strand : -
Note : COG1134 ABC-type polysaccharide/polyol phosphate transport system, ATPase component

DNA sequence : 
ATGATTGAAATTCGTAATATCACAAAATCGTATCAGACTACTACTGGTAGAGAATATATATTTCGCGACCTATCAGTCTT
GGTTCCACCGGAGCGTAATGTCGCATTAATAGGACGAAACGGAGCTGGTAAGTCGACGTTATTACGTCTAATTGGCGGAT
TGGATGTGCCCGATAGAGGGCACATCAAAGTAAGTGGTTCGATTTCTTGGCCGGTTGGATTGTCTGGCGGCTTTCAGGGC
ACGCTTTCGGCCAGAGAAAACGTGAAATTTGTTGCCCGCGTGTATGGCGCAGAAGGGGAACGTATGCGGCAGATTGTCAA
ATTCGTTGAAGAATTCGCCGAAATTGGCCGTTATTTTGACCGCCCGGTTAAAACTTTTTCCTCTGGCATGAGATCTCGTG
TTGCATTCGGTCTAAGTCTTGCATTTGATTTTGATTATTATTTGATTGATGAGGCGATGTCTACCGGTGATGCGCACTTC
AGAAACAAGGCTACTCAAGCATTCAAAGATCGGATTAGTAAGTCTAAGGTCATACTTGTAACGCACTCAATGTCTCAAGT
CCGTGCTATGTGTGATTACGTCTTAGTTGTCGACGATGGAAAAGTATATGCATATAACGACATAGAGTCGGGTATCAAGC
GATATGAAAGCGAAAGCTGA

Protein sequence : 
MIEIRNITKSYQTTTGREYIFRDLSVLVPPERNVALIGRNGAGKSTLLRLIGGLDVPDRGHIKVSGSISWPVGLSGGFQG
TLSARENVKFVARVYGAEGERMRQIVKFVEEFAEIGRYFDRPVKTFSSGMRSRVAFGLSLAFDFDYYLIDEAMSTGDAHF
RNKATQAFKDRISKSKVILVTHSMSQVRAMCDYVLVVDDGKVYAYNDIESGIKRYESES

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
kpsT YP_854396.1 polysialic acid transport ATP-binding protein KpsT Not tested PAI I APEC-O1 Protein 3e-55 54
kpsT CAE85223.1 KpsT protein Virulence PAI V 536 Protein 1e-57 53
ctrD NP_273138.1 capsule polysaccharide export ATP-binding protein CtrD Not tested IHT-A Protein 8e-43 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
TKWG_23405 YP_006381260.1 polysaccharide ABC transporter ATP-binding protein VFG1449 Protein 1e-55 54
TKWG_23405 YP_006381260.1 polysaccharide ABC transporter ATP-binding protein VFG0258 Protein 3e-43 42