Gene Information

Name : TKWG_19570 (TKWG_19570)
Accession : YP_006380690.1
Strain : Advenella kashmirensis WT001
Genome accession: NC_017964
Putative virulence/resistance : Virulence
Product : ABC transporter
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3370362 - 3371177 bp
Length : 816 bp
Strand : +
Note : COG1120 ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components

DNA sequence : 
ATGGATCCTATAGAAAGCCAAGACCTTACGCTAAAGTACGATACCCGGGTCGTCATTGACGGGCTGAATCTGGCCATTCC
CAGGGCAAAGATTACAGTACTTGTCGGCAGTAATGGCTGCGGCAAAAGCACTCTGCTCAAATCGTTTGCCCGGCTGATCC
GGCCGTCGCAGGGTACGGTCCTGCTCAACGGCAAGGATATCCATCGCCGTTCCACGGCAGCGGTAGCACGCGAGCTGGCC
ATTTTGCCGCAAAGCCCGGCAGCGCCGGAAGGCCTGTCCGTTTACCAATTGGTGCGCCTGGGAAGATTTCCCCACCAGAG
CTGGCTGCAACAGTGGTCCGGGGAAGACGAGGCCATCGTGACGCAGGCGCTGGCGCAAACGGAACTGACCGAATTTCAGG
ACCGGCCGGTAGATGCCCTGTCCGGCGGACAGCGCCAGCGCGCCTGGATTGCAATGACGCTGGCTCAAAACACAGACACG
TTGCTGCTGGACGAACCCACCACATACCTGGATCTGGCACACCAGATCGAAGTGCTGGACCTGTTGTACGAGTTGAATGC
GACCAGACAGAAAACCATCGTCATGGTTCTGCACGATCTGAATCTGGCCTGCCGTTATGCACACAATATGGTTGCCATTG
CCAACAGACAGGTCTACGCACAAGGCGATCCGGCACAGGTGCTCAATGCAACCATGGTTCAGGATGTATTTCATCTGCAA
AGTAAAATTGTAAAAGACCCGCTTTACGGCACCCCCATGTGCATCCCCATTGGCAAAGGAATTCAGAGTGCAGGCACTGA
CGCGTCCCAGGGCTGA

Protein sequence : 
MDPIESQDLTLKYDTRVVIDGLNLAIPRAKITVLVGSNGCGKSTLLKSFARLIRPSQGTVLLNGKDIHRRSTAAVARELA
ILPQSPAAPEGLSVYQLVRLGRFPHQSWLQQWSGEDEAIVTQALAQTELTEFQDRPVDALSGGQRQRAWIAMTLAQNTDT
LLLDEPTTYLDLAHQIEVLDLLYELNATRQKTIVMVLHDLNLACRYAHNMVAIANRQVYAQGDPAQVLNATMVQDVFHLQ
SKIVKDPLYGTPMCIPIGKGIQSAGTDASQG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fecE AAL08451.1 ATP-binding protein FecE Virulence SRL Protein 3e-52 47
SPN23F_09560 YP_002510939.1 ferric siderophore ABC transporter ATP-binding protein Virulence PPI-1 Protein 6e-59 47
SP_1035 NP_345510.1 iron-compound ABC transporter ATP-binding protein Not tested PPI-1 Protein 6e-59 47
iusE YP_005143742.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 9e-57 46
DIP0585 NP_938961.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 4e-47 45
fagC YP_005682397.1 ATP binding cytoplasmic membrane protein Virulence PiCp 1 Protein 1e-54 44
fagC YP_005684488.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 1e-54 44
fagC YP_005680307.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 1e-54 44
fagC YP_003782430.1 ABC transporter ATP-binding protein Not tested PiCp 1 Protein 1e-54 44

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
TKWG_19570 YP_006380690.1 ABC transporter BAC0164 Protein 2e-52 47

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
TKWG_19570 YP_006380690.1 ABC transporter VFG1042 Protein 2e-52 47
TKWG_19570 YP_006380690.1 ABC transporter VFG0925 Protein 2e-58 44