Gene Information

Name : TKWG_19225 (TKWG_19225)
Accession : YP_006380640.1
Strain : Advenella kashmirensis WT001
Genome accession: NC_017964
Putative virulence/resistance : Resistance
Product : small multidrug resistance protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3307893 - 3308228 bp
Length : 336 bp
Strand : +
Note : COG2076 Membrane transporters of cations and cationic drugs

DNA sequence :
ATGATTTCCACTTATTTATATCTGGCCGGCGCGATTATCATGGAAGTGATCGCTACTTCCTTTCTAAAATCATCCGAGAG
CTTCACCCGGCTCGTTCCTTCAATCATCACCATTGCGGGATACGCCTCTGCGTTTTACCTTTTGTCACTCAGCTTACGCA
CAATGCCTACTGGTATTGCGTATGCAATATGGTCCGGAGCTGGTATCGTGCTCATATCCCTGATAAGCTGGATCTGGTTC
GGGCAATCTCTTGACGGGGCAGCACTGCTGGGCATCGGCCTGATTATTGCCGGTGTCATTGTCATCAATGTATTTTCCGG
CAGCGTTTCGCATTAG

Protein sequence :
MISTYLYLAGAIIMEVIATSFLKSSESFTRLVPSIITIAGYASAFYLLSLSLRTMPTGIAYAIWSGAGIVLISLISWIWF
GQSLDGAALLGIGLIIAGVIVINVFSGSVSH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
qacEdelta1 AGF35063.1 QacEdelta1 Not tested SGI1 Protein 4e-14 56
qacEdelta1 CAJ77088.1 Quaternary ammonium compound-resistance protein Not tested AbaR1 Protein 4e-14 56
qacEdelta1 ACN81026.1 QacEdelta1 Not tested AbaR5 Protein 6e-14 56
qacEdelta1 AFV53123.1 QacEdelta1 multidrug exporter Not tested AbGRI2-1 Protein 4e-14 56
qacEdelta1 AGK06933.1 QacEdelta1 Not tested SGI1 Protein 4e-14 56
qacE-deltal ACF06159.1 quartenary ammonium compound resistance protein Not tested Tn5036-like Protein 4e-14 56
qacEdelta1 AAK02047.1 quaternary ammonium compound and disinfectant protein Not tested SGI1 Protein 4e-14 56
qacEdelta1 AGK36647.1 QacEdelta1 Not tested AbaR26 Protein 4e-14 56
qacEdelta1 AGK06970.1 QacEdelta1 Not tested SGI1 Protein 4e-14 56
qacE-delta1 ACY75523.1 QacE-delta1 Not tested Tn6060 Protein 4e-14 56
qacEdelta1 AAK02056.1 quaternary ammonium compound and disinfectant protein Not tested SGI1 Protein 4e-14 56
qacEdelta1 AGK06979.1 QacEdelta1 Not tested SGI1 Protein 4e-14 56
qacE-delta1 ACY75532.1 QacE-delta1 Not tested Tn6060 Protein 4e-14 56
qacEdelta1 ABB48428.1 QacEdelta1 Not tested SGI1 Protein 4e-14 56
qacE-delta1 AET25389.1 QacE-delta1 Not tested PAGI-2(C) Protein 4e-14 56
qacEdelta1 ABZ01839.1 QacEdelta1 Not tested SGI2 Protein 4e-14 56
ACICU_00227 YP_001844886.1 membrane transporter Not tested AbaR20 Protein 6e-14 56
qacEdelta1 AGK07016.1 QacEdelta1 Not tested SGI1 Protein 4e-14 56
qacE-delta1 AFG30112.1 QacE-delta1 Not tested PAGI-2 Protein 4e-14 56
qacEdelta1 CAJ77030.1 Quaternary ammonium compound-resistance protein Not tested AbaR1 Protein 4e-14 56
qacEdelta1 YP_005797134.1 quaternary ammonium compound-resistance protein Not tested AbaR4e Protein 6e-14 56
qacEdelta1 AGK07074.1 QacEdelta1 Not tested SGI1 Protein 4e-14 56
qacEdelta1 AGF34989.1 QacEdelta1 Not tested SGI1 Protein 4e-14 56
qacEdelta1 CAJ77049.1 Quaternary ammonium compound-resistance protein Not tested AbaR1 Protein 4e-14 56
qacEdelta1 YP_005797150.1 quaternary ammonium compound-resistance protein Not tested AbaR4e Protein 6e-14 56
qacEdelta1 AGK07100.1 QacEdelta1 Not tested SGI1 Protein 4e-14 56
qacEdelta1 AGF35028.1 QacEdelta1 Not tested SGI1 Protein 4e-14 56
qacEdelta1 CAJ77052.1 Quaternary ammonium compound-resistance protein Not tested AbaR1 Protein 4e-14 56
ebr YP_006098377.1 putative ethidium bromide resistance protein Not tested Tn2411 Protein 6e-14 56
qacEdelta1 AGK07109.1 QacEdelta1 Not tested SGI1 Protein 4e-14 56

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
TKWG_19225 YP_006380640.1 small multidrug resistance protein BAC0002 Protein 4e-18 70
TKWG_19225 YP_006380640.1 small multidrug resistance protein NC_010410.6003348.p0 Protein 4e-18 70
TKWG_19225 YP_006380640.1 small multidrug resistance protein CP001138.1.gene1489. Protein 7e-18 63
TKWG_19225 YP_006380640.1 small multidrug resistance protein BAC0324 Protein 5e-16 62
TKWG_19225 YP_006380640.1 small multidrug resistance protein BAC0150 Protein 3e-15 61
TKWG_19225 YP_006380640.1 small multidrug resistance protein NC_002695.1.913273.p Protein 3e-15 61
TKWG_19225 YP_006380640.1 small multidrug resistance protein BAC0322 Protein 5e-15 59
TKWG_19225 YP_006380640.1 small multidrug resistance protein CP004022.1.gene1549. Protein 4e-12 56
TKWG_19225 YP_006380640.1 small multidrug resistance protein BAC0323 Protein 2e-14 56
TKWG_19225 YP_006380640.1 small multidrug resistance protein BAC0329 Protein 1e-12 48
TKWG_19225 YP_006380640.1 small multidrug resistance protein BAC0325 Protein 2e-10 46
TKWG_19225 YP_006380640.1 small multidrug resistance protein BAC0249 Protein 9e-09 44
TKWG_19225 YP_006380640.1 small multidrug resistance protein AE000516.2.gene3301. Protein 9e-09 44
TKWG_19225 YP_006380640.1 small multidrug resistance protein BAC0327 Protein 2e-11 43
TKWG_19225 YP_006380640.1 small multidrug resistance protein BAC0326 Protein 5e-12 43
TKWG_19225 YP_006380640.1 small multidrug resistance protein BAC0140 Protein 2e-06 43
TKWG_19225 YP_006380640.1 small multidrug resistance protein BAC0321 Protein 2e-12 42