|
Name : TKWG_17645 (TKWG_17645) Accession : YP_006380407.1 Strain : Advenella kashmirensis WT001 Genome accession: NC_017964 Putative virulence/resistance : Unknown Product : seryl-tRNA ligase Function : - COG functional category : - COG ID : - EC number : 6.1.1.11 Position : 3040657 - 3042015 bp Length : 1359 bp Strand : - Note : COG0172 Seryl-tRNA synthetase DNA sequence : ATGTTAGATCCTGTTTTATTGCGAAAAGAGCTTCCCCTTGTCATCGCTGCGCTCAAGCGCCGCAACGTCGATTTTGACGA GGCCCGCTTCAACCAGCTCGAAGCCCGGCGCAAAGACGTGCAAATCCAGACCGAGACCTTGCAGGCGCAGCGCAACGCGC TGGCCAAGCAAATCGGTCAGCTCAAGTCGCGTGGGGAAGACGCCAGTGCCGTCATGGCCGAATCGCAGGCGCTGCCCGGC AAACTCAAGGCGCTGGAAGAAGAACTGGCTGGTATTCGCAGCGAGCTGGACGGCTGGCTTATGACGATTCCCAACCTGCC GCACAGCTCCGTACCCCAGGGCAAAGACAGTGACGATAACGTCGAGGTCCGGCGCTGGCTGGGTACCCAGGCGGGCTACG TGACTGATCACAGCGAACCGCCAGCCAAGGGTTTTGAGACCCAGGATCATGTGACGGTGGGCGAACGCCTTGGCCTGGAA TTTGATACGGCAGTCAAGCTCACCGGTGCGCGCTTTTCTTTCATGCGCGGCGGCATGGCGCGCCTGCATCGCGCGCTGGC CCAGTTCATGCTGGACTTGCACACGAGCGAGCATGGCTATACCGAATGCTACACACCGTACATTGTCAATAGTTCAACCC TGCTGGGCACCGGTCAGTTGCCCAAGTTCAAGGACGATATGTTCTGGGTGACCAAAGGCGGCGAAGACGAACCCCAGACC GACCAGCAGGGCAAGCCGATAGAAAAGGAAGATCTTTATTTGATCTCCACATCGGAAATTACGTTGACCGCCACGGTCAA GAACGAAATAGTGCCCGGCGCCAGTCTGCCTTTGCGCCTGACGGCGCATACACCGTGTTTTCGCTCTGAAGCCGGCAGCG GCGGTCGCGACACCCGGGGCATGATCCGTCAGCATCAGTTCGACAAAGTGGAAATGGTGCAGATTGTCCATCCGGATACC TCCTATGATGCGCTGGAGCAAATGGTGGGGCATGCTGAAAAAGTGCTGCAGTTGCTGCAACTGCCTTACCGTGTCATGCA GTTGTGCACTGGTGATATGGGTTTTGGCGCAGCCAAAACTTATGATCTGGAAGTCTGGATTCCGGCACAGAACACCTGGC GCGAGATTTCTTCTGTCTCCAATTGCGAAGCCTTCCAGGCTCGACGCCTGCAGGCGCGGTTCCGTAACGAACAGGGCAAA ACCGAATATCTGCATACGCTTAACGGCTCTGGCCTGGCAGTAGGACGCACACTGGTGGCGCTTATTGAAAACTATCAGCA GGCCGACGGCAGCATCGAGATTCCTGAGGTATTGCGTCCCTATATGGGTGGTGTGGCGCGCCTGGCTCCTGCAGCTTAA Protein sequence : MLDPVLLRKELPLVIAALKRRNVDFDEARFNQLEARRKDVQIQTETLQAQRNALAKQIGQLKSRGEDASAVMAESQALPG KLKALEEELAGIRSELDGWLMTIPNLPHSSVPQGKDSDDNVEVRRWLGTQAGYVTDHSEPPAKGFETQDHVTVGERLGLE FDTAVKLTGARFSFMRGGMARLHRALAQFMLDLHTSEHGYTECYTPYIVNSSTLLGTGQLPKFKDDMFWVTKGGEDEPQT DQQGKPIEKEDLYLISTSEITLTATVKNEIVPGASLPLRLTAHTPCFRSEAGSGGRDTRGMIRQHQFDKVEMVQIVHPDT SYDALEQMVGHAEKVLQLLQLPYRVMQLCTGDMGFGAAKTYDLEVWIPAQNTWREISSVSNCEAFQARRLQARFRNEQGK TEYLHTLNGSGLAVGRTLVALIENYQQADGSIEIPEVLRPYMGGVARLAPAA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 6e-89 | 51 |
