Gene Information

Name : smpB (TKWG_11710)
Accession : YP_006379522.1
Strain : Advenella kashmirensis WT001
Genome accession: NC_017964
Putative virulence/resistance : Unknown
Product : SsrA-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2036164 - 2036625 bp
Length : 462 bp
Strand : -
Note : COG0691 tmRNA-binding protein

DNA sequence :
ATGAGTATTACCGACAATCGCAAGGCAACCCACGACTATTTCATTGAAGAGCGCTTCGAGGCTGGCATTGTCCTGGAAGG
CTGGGAAGTCAAGTCCATCCGGGCCGGCCGCGTGCAACTGGGTGAGAGTTATGTCATTGTGCGCGACGGCGAATTGCAGT
TGCTGAATATGCACGTCAGCCCGCTGGCGACCGCCTCAACGCATATTCATCCCAACGCCACCCGCACCCGCAAGTTGTTG
CTGCATAAGAACGAGATTGACAAACTTATTGGCAAGGTGGAAATCCGTGGTTATACACTGGTGCCATTGAATCTGCACTT
TCGCAACGGCAAAATCAAGCTGGAGTTTGGACTGGGCAAAGGCAAAAAGCTGCACGACAAGCGCGACAGCGCTCGCGACA
AAGACTGGCAGCGTGAGAAGGAGCGTATTATGAAACACGATACGCGCAAACGCGATTCGTAA

Protein sequence :
MSITDNRKATHDYFIEERFEAGIVLEGWEVKSIRAGRVQLGESYVIVRDGELQLLNMHVSPLATASTHIHPNATRTRKLL
LHKNEIDKLIGKVEIRGYTLVPLNLHFRNGKIKLEFGLGKGKKLHDKRDSARDKDWQREKERIMKHDTRKRDS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
smpB NP_230495.1 SsrA-binding protein Not tested VPI-1 Protein 9e-30 50
unnamed AET14351.1 SsrA-binding protein Not tested SaPI68111 Protein 2e-21 46