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Name : lysS (TKWG_11140) Accession : YP_006379430.1 Strain : Advenella kashmirensis WT001 Genome accession: NC_017964 Putative virulence/resistance : Virulence Product : lysyl-tRNA ligase Function : - COG functional category : - COG ID : - EC number : 6.1.1.6 Position : 1930772 - 1932238 bp Length : 1467 bp Strand : - Note : COG1190 Lysyl-tRNA synthetase (class II) DNA sequence : ATGAACGACAACCAGAAAGACGCGCCCGTTACCGAAGTGGACGAAAACAAACTCATCGCCGAAAGGCGCGGAAAACTGTC GCGCCTGCGCTCGGCAGGCGTGGCTTATCCCAATAGCTACAAACCGCAACACAAGGCACAGGCCCTGCACGAGCAGTTTG ACCAGTTCGACAAAGAAACCCTGGACCCTCAGGCCAATCCTGCCTGTGTTGCCGGCCGAATGATGCTCAAGCGTGTTATG GGCAAAGCCAGTTTTGCCACCATCCAGGACGCTAGCGGGCGCATTCAGATTTATCTGGACAAAAAAGGCGTGGGCGAAGA GGTTTACGAACAGTTCAAGACCTGGGACATCGGTGACATCATCGGCGTCAGTGGCCGCGTCTTCAAGACCAACAAGGGCG AGCTGTCGATTCACGCAGAATCGATCAATCTGATTTCCAAATCCCTGCGACCCCTGCCCGACAAATTCCACGGCATCGCC GACCAGGAACTGCGTTATCGCCAGCGCTATGTCGATCTGATCATGACCGAAGAGTCGCGCAACACGTTCAAGGTGCGCAG CAAGGCCATTGCCGCAATGCGCTCGGTCATGAACGACGCGGGTTTTCTGGAAGTGGAAACCCCCATGCTGCACCCTATTC CCGGTGGTGCCGCGGCCAAACCGTTTGTGACGCATCACAACGCGCTGGATATGCAGATGTTCCTGCGCATTGCACCCGAA CTGTATCTGAAGCGGCTTGTCGTGGGTGGTTTCGAACGCGTATTTGAGATCAACCGCAACTTTCGCAACGAAGGCGTCAG CCCGCGGCACAATCCTGAATTCACAATGATGGAGTTCTATGCGGCCTACACAGACTACCAGTGGCTTATGGACTTTACCG AGCAGTTGCTGCGCGATGTTGCCATTGAAGCGACCGGCAGCGCGGTTCTGACGCATCAAGGCAAACCACTGGACCTGAGC CAGCCGTTCGATCGCCTGACAATCACCCAAGCTATCATGAAATACGCCGAGGGATATACAGAACCACAATTGAATGACAT CGAGTTCCTGCGCACCGAATTGCGCAGACTTGGCGCAGAAGTAGATGGCCCGGTATTGGCACGCGCCGGTATTGGCGCAT TGCAGCTGGCGTTGTTCGAAGAAACGGCCGAATCAAAATTGTGGAACCCGACCTTCATCATTGATTACCCGGTAGAAGTC TCTCCATTGGCACGTGCCTCGGACAGCAACCCGGAAATCACTGAACGCTTCGAGCTATTCATTACCGGCCGCGAAATTGC CAACGGTTTCTCAGAGCTGAATGATCCCGAAGACCAGGCAGCTCGCTTCCAGCACAGGTTGTTGCCAAGGATGCCGGCGA CGAAGAAGCCATGTACTACGATGCCGATTATATTCGTGCGCTCGAATACGGCATGCCGCCAGCCGGCGGCTGCGGCATTG GCATTGACCGGTACATTATGTTGCTGA Protein sequence : MNDNQKDAPVTEVDENKLIAERRGKLSRLRSAGVAYPNSYKPQHKAQALHEQFDQFDKETLDPQANPACVAGRMMLKRVM GKASFATIQDASGRIQIYLDKKGVGEEVYEQFKTWDIGDIIGVSGRVFKTNKGELSIHAESINLISKSLRPLPDKFHGIA DQELRYRQRYVDLIMTEESRNTFKVRSKAIAAMRSVMNDAGFLEVETPMLHPIPGGAAAKPFVTHHNALDMQMFLRIAPE LYLKRLVVGGFERVFEINRNFRNEGVSPRHNPEFTMMEFYAAYTDYQWLMDFTEQLLRDVAIEATGSAVLTHQGKPLDLS QPFDRLTITQAIMKYAEGYTEPQLNDIEFLRTELRRLGAEVDGPVLARAGIGALQLALFEETAESKLWNPTFIIDYPVEV SPLARASDSNPEITERFELFITGREIANGFSELNDPEDQAARFQHRLLPRMPATKKPCTTMPIIFVRSNTACRQPAAAAL ALTGTLCC |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | CAD66193.1 | putative lysil-tRNA synthetase LysU | Not tested | PAI III 536 | Protein | 3e-113 | 52 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| lysS | YP_006379430.1 | lysyl-tRNA ligase | VFG1668 | Protein | 2e-113 | 52 |
