Gene Information

Name : TKWG_08955 (TKWG_08955)
Accession : YP_006379115.1
Strain : Advenella kashmirensis WT001
Genome accession: NC_017964
Putative virulence/resistance : Virulence
Product : winged helix family two component transcriptional regulator
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1545466 - 1546143 bp
Length : 678 bp
Strand : -
Note : COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain

DNA sequence : 
ATGCACGTACTACTTGTCGAAGATGATGCACTGGTGGCTAGCGGCATTGTCACCGGTTTAAAACTACATGGGCTGACCGT
TGACCATGTCAATTGCGCGAGTCTGGCCGATACCGCATTGAAGTCCTCGCATTTCGATGTGTGCATTCTTGATCTTGGTC
TGCCGGACGAAGACGGCATTTGCCTGCTGCATCGCTGGCGTGATCAGGGCCAGCAACTGCCTATCCTGGTGCTGACAGCG
CGCGACGCCCTTTGCCATCGGATAACAGGATTGCTCGGCGGTGCCGACGATTATCTGGTCAAACCCTTCGATTTACTGGA
GTTGCAGGCCCGACTGCACGTGCTAACGCGACGCCGCGCCGGACGCAGCAAAGACTTTGTCGAACACGGCGGCCTGGTCT
TCTGTGCGTCAACGGGCGAGGTCCGGCTGCATGGCCGCCCGGTTTCATTGGCCAGGCGCGAACTGGCATTGCTGCGCGCC
CTATTACAAAATCCGAAAGCGATCCTGAGCACGGAACAATTATGCGATAGCGTCTACGGTTATGAACAAAGCCTGGAGAG
CAATGCCATTAATGTTCATGTGTATCACCTGCGTCGCAAGCTCGGCAACAATATCGTCGAGACAGTCAGGGGCCTGGGCT
ACCGGCTTGGATTGCCGGAGAAAAAGGACGAACAATGA

Protein sequence : 
MHVLLVEDDALVASGIVTGLKLHGLTVDHVNCASLADTALKSSHFDVCILDLGLPDEDGICLLHRWRDQGQQLPILVLTA
RDALCHRITGLLGGADDYLVKPFDLLELQARLHVLTRRRAGRSKDFVEHGGLVFCASTGEVRLHGRPVSLARRELALLRA
LLQNPKAILSTEQLCDSVYGYEQSLESNAINVHVYHLRRKLGNNIVETVRGLGYRLGLPEKKDEQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
armR AAN62112.1 putative response-regulator ArmR Not tested PAGI-2(C) Protein 3e-41 50

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
TKWG_08955 YP_006379115.1 winged helix family two component transcriptional regulator BAC0487 Protein 1e-29 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
TKWG_08955 YP_006379115.1 winged helix family two component transcriptional regulator VFG0473 Protein 2e-31 41