Gene Information

Name : xerD (TKWG_08340)
Accession : YP_006379025.1
Strain : Advenella kashmirensis WT001
Genome accession: NC_017964
Putative virulence/resistance : Unknown
Product : site-specific tyrosine recombinase XerD
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1436431 - 1437348 bp
Length : 918 bp
Strand : +
Note : COG4974 Site-specific recombinase XerD

DNA sequence :
ATGCCAGATCAGCAAGTGGCGCCAGCCCACCAGCACACCATTGATCCATTTATTGATGCCTTGTGGCTGGAAGACGGGTT
ATCGCAGAATACGCTAGCGGCCTACCGCCAGGATCTCAAGGGGCTGGCCGATTTTCTGGCAAAGCGAAAACCGGCCAAAA
CCCTGCTGGAAACGACCAGGGATGACATTGAAGCCTGGTTCGCCGCCAGGCATGCCCACACCAAAGCTACCACCGCCAAT
CGTCGTTTGGCCACGCTCAAACGTTATTTTGCCTGGGCCATCCGTACCCATCAGATCAGTGAGGATCCGTGCCTGACGCT
GCATTCGGCCCGCCAGCCGACGCGGTTTCCCAAAACCATGAGCGAGCAGCAGGTAGACCAGTTGCTGGAGGCGCCCAACA
TCCGGGATGCGCTGGGATTGCGCGACCGCGCCATGCTTGAAACCCTGTATGCGTCGGGCTTGCGGGTCACTGAACTGGTT
AGCCTGAAAGTGCTGCATTTAAGCCTGAACGAGAATGTTGTCCGGGTGGTCATGGGCAAGGGTGGCAAGGACCGGCTGGT
CCCGGTGGGCGCCCAGGCTGCCTACTGGCTGGAACGCTATCTGAAAGAGGCGCGTCCCGATTTGCTGGGGCGGCGTCAGT
CTGATGATTTGTTTCTGACTCGTCGCGCCACTGGTATGACGCGCCAGGCGTTCTGGCAACTGATCAAGAAATATGCCCTG
CAGGCAGACATTCATACGCCGCTGTCGCCACATACCCTGCGGCACGCCTTTGCCACGCATCTGCTCAATCACGGCGCAGA
CTTGCGTGTTGTGCAATTGCTGCTTGGGCATGCCGATATTTCCACCACCCAGATCTATACCCACGTAGCGCGGGAGCGGC
TCAAGCAGTTACACGCGCAACACCATCCGCGGGCATAA

Protein sequence :
MPDQQVAPAHQHTIDPFIDALWLEDGLSQNTLAAYRQDLKGLADFLAKRKPAKTLLETTRDDIEAWFAARHAHTKATTAN
RRLATLKRYFAWAIRTHQISEDPCLTLHSARQPTRFPKTMSEQQVDQLLEAPNIRDALGLRDRAMLETLYASGLRVTELV
SLKVLHLSLNENVVRVVMGKGGKDRLVPVGAQAAYWLERYLKEARPDLLGRRQSDDLFLTRRATGMTRQAFWQLIKKYAL
QADIHTPLSPHTLRHAFATHLLNHGADLRVVQLLLGHADISTTQIYTHVARERLKQLHAQHHPRA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00307 YP_008207772.1 Site-specific recombinase XerD Not tested AbaR25 Protein 3e-57 55
BJAB0868_00311 YP_008211637.1 Site-specific recombinase XerD Not tested AbaR26 Protein 3e-57 55