Gene Information

Name : ureC (TKWG_07855)
Accession : YP_006378964.1
Strain : Advenella kashmirensis WT001
Genome accession: NC_017964
Putative virulence/resistance : Virulence
Product : urease subunit alpha
Function : -
COG functional category : -
COG ID : -
EC number : 3.5.1.5
Position : 1357540 - 1359249 bp
Length : 1710 bp
Strand : +
Note : COG0804 Urea amidohydrolase (urease) alpha subunit

DNA sequence :
ATGGCAAAGATTTCTCGATCTGAATATGTGGCTTCATATGGTCCGACCACGGGTGATCGCATCCGGCTGGCCGATACCAA
TCTGTTGATCGAAGTCGAAAAAGACCTGTGTGCAGGCGGTAACGAAGCGGTTTTCGGCGGCGGCAAATCGGTGCGCGAGT
CGATGGGGCAATCGTGTGCCACACGGGCCGAAGGTACCCCCGATCTGGTGATTACCGGTGCGATTATTCTCGATCACTGG
GGCATCATCAAAGCTGATGTGGGGGTGCGAGACGGCCGTATCGTGGCCTTGGGCAAAGCCGGCAACCCTGACACAATGGA
CGGTGTACATCCTGATCTGGTGATCGGACCGTCTACCGAAATCATGTCGGGCAATGGGCTCATTATGACGGCGGGTGCAG
TTGACACCCACGTTCACTTTGTTGGCCCGCAGATGCTGCAAATCGCATTGGCCTCTGGCACTACGACAGTGACAGGGGGC
GGTTCGGGGCCGACAGAAGGTTCCAAGGCAACCCTGGCTACGCCAGGGGCGTGGTGGATGGAGCGCATGCTCGAAGGGTT
TGAGCCTTGGCCCGTGAATGTACTCTTTCTGGGGCGCGGTAATACGGTATCTCACGAATCCTTGTGGGAGCAATTGCGTG
CGGGTGTGGGCGGCTTCAAAGTCCATGAAGACTGGGGCGCCACGCCGGCGGTAATCGATGCAGCGCTTCAGGTCGCAGAT
GCCTCCGGTGTACAGGTTGCGATTCACTCCGATACCCTTAACGAGGCCGGCTTTGTCGAAGATATGCTCAAAGCCGTTGC
CGGCCGCTCGTTCCATTCGTTCCACACCGAAGGTGCCGGCGGCGGGCATGCGCCCGATATTATCCGCATTGCCGGGGAAC
CCAATGTGTTGCCTGCCTCGACCAACCCGACCCGTCCTTTTACCCGCAATACGGTGGACGAGCATCTGGATATGGTCATG
GTGGCGCACCATTTGAATCCGCGGGTCCCTAACGATCTTGCCTTTGCGGAAAGCCGTGTACGGGCGGGCACCATTGCCGC
CGAAGATGTGCTGCACGATATTGGCGCGCTTTCGATCATGTCTTCTGATGCGCAGGCCATGGGCCGTATCGGTGAGGTCG
TCATCCGTACCTGGCAGACGGCACACCGAATGAAGCAGCTTCGGGGCTCGTTGCCAGGCGATACGCTGGCAGACAATCAC
CGGGCGCGCCGGTATGTGGCCAAATATACCATTTGCCCTGCCATCGCCCACGGACTGGAAAAGCACGTCGGATCTATCGA
AGTCGGAAAAATGGCCGATCTGGTGCTTTGGCAGCCTGCGCTTTTCGGTATACGTCCTACGATTGTATTCAAGGGCGGCA
TGGCCGCGACCGCAGCGCTTGGCGATCCCAATGCATCCATTCCCACGCCGCAACCGGTGCTTGAGCGCATCGGCTTTAAT
GTGTATTCGCCGGCAGCCGCCGCTACCAGCGTGGCCTTTGTGTCGCAGGTGGCGATTGATGACGGGCTTGCTGGCCGCTT
AAATATCAAGCGCCCTCTGGTCGCTATCGAAAACTGCCGGGCTCGCACGAAGGCCGATCTGCCTGAAAACTCGGCATTGC
CGCATATAGAGGTGGATCCCGATAGCTACGCCGTCAAGGTCGACGGTGAACTGATCGATCACGAGCCCGCAGATGAGGTT
CCCATGGCTCAACGATATTTTCTATTCTGA

Protein sequence :
MAKISRSEYVASYGPTTGDRIRLADTNLLIEVEKDLCAGGNEAVFGGGKSVRESMGQSCATRAEGTPDLVITGAIILDHW
GIIKADVGVRDGRIVALGKAGNPDTMDGVHPDLVIGPSTEIMSGNGLIMTAGAVDTHVHFVGPQMLQIALASGTTTVTGG
GSGPTEGSKATLATPGAWWMERMLEGFEPWPVNVLFLGRGNTVSHESLWEQLRAGVGGFKVHEDWGATPAVIDAALQVAD
ASGVQVAIHSDTLNEAGFVEDMLKAVAGRSFHSFHTEGAGGGHAPDIIRIAGEPNVLPASTNPTRPFTRNTVDEHLDMVM
VAHHLNPRVPNDLAFAESRVRAGTIAAEDVLHDIGALSIMSSDAQAMGRIGEVVIRTWQTAHRMKQLRGSLPGDTLADNH
RARRYVAKYTICPAIAHGLEKHVGSIEVGKMADLVLWQPALFGIRPTIVFKGGMAATAALGDPNASIPTPQPVLERIGFN
VYSPAAAATSVAFVSQVAIDDGLAGRLNIKRPLVAIENCRARTKADLPENSALPHIEVDPDSYAVKVDGELIDHEPADEV
PMAQRYFLF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ureC NP_286680.1 urease subunit alpha Virulence TAI Protein 8e-152 59
ureC NP_287088.1 urease subunit alpha Not tested TAI Protein 8e-152 59
ureC YP_005684266.1 Urease alpha subunit Not tested PiCp 7 Protein 1e-150 57
ureC YP_005682174.1 Urease alpha subunit Not tested PiCp 7 Protein 1e-150 57
ureC YP_003784325.1 urease subunit alpha Not tested PiCp 7 Protein 1e-150 57
ureC YP_005686358.1 Urease alpha subunit Not tested PiCp 7 Protein 1e-150 57

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ureC YP_006378964.1 urease subunit alpha VFG0270 Protein 3e-137 54