Gene Information

Name : HMPREF0351_13107 (HMPREF0351_13107)
Accession : YP_006377713.1
Strain :
Genome accession: NC_017963
Putative virulence/resistance : Unknown
Product : single-strand DNA binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 245790 - 246275 bp
Length : 486 bp
Strand : -
Note : -

DNA sequence :
ATGATTAATAATGTAACTTTAGTAGGACGGTTAACCAAAGATCCAGATTTACGTTATACCGCAAGTGGCACAGCAGTAGC
GACTTTTACCCTAGCCGTCAACCGAAATTTCGCGAATCAAAACGGCAATCGAGAAGCCGATTTTATTAACTGCGTGATTT
GGCGCAAACCAGCAGAAACAATGGCGACATTAGCTAAAAAAGGCGGCTTGATCGGTGTTGTCGGACGGATTCAAACACGA
ACTTATGACAACCAGCAAGGACAACGTGTGTATGTGACTGAAGTTGTAGCAGATAACTTTCAACTATTAGAAAGTAAAGC
AGCGACAGAGAGCCGTGCGCACGCTGATCAATCGTCCACCAGTCCAAGCACCGCCACCTTTGAACAACGGGATACAGCGA
CGCCTAACAACAATGGATTGAACGCTTCACAGAATCCATTTGGTGGACAATCAATCGATATTAGCGATGATGATCTACCG
TTTTAG

Protein sequence :
MINNVTLVGRLTKDPDLRYTASGTAVATFTLAVNRNFANQNGNREADFINCVIWRKPAETMATLAKKGGLIGVVGRIQTR
TYDNQQGQRVYVTEVVADNFQLLESKAATESRAHADQSSTSPSTATFEQRDTATPNNNGLNASQNPFGGQSIDISDDDLP
F

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ssb-2 NP_814280.1 single-strand binding protein Not tested Not named Protein 2e-44 61
ef0020 AAM75226.1 EF0020 Not tested Not named Protein 2e-44 61
SAOV_0290 YP_005735807.1 Single-stranded DNA-binding protein, phage associated Not tested ¥ÕSa1 Protein 2e-29 52
SH1792 YP_253707.1 single strand DNA binding protein Not tested ¥ÕSh1 Protein 5e-30 50
MW1921 NP_646738.1 single-strand DNA-binding protein Not tested ¥ÕSa3 Protein 2e-31 48
SAKOR_01963 YP_008492151.1 Single-strand DNA binding protein Not tested ¥ÕSa3 Protein 2e-32 47
ssb-3 NP_814291.1 single-strand binding protein Not tested Not named Protein 2e-27 47
ef0030 AAM75236.1 EF0030 Not tested Not named Protein 2e-27 47
SAUSA300_1958 YP_494609.1 single-strand binding protein Not tested ¥ÕSa3 Protein 6e-32 46
SAUSA300_1958 YP_494609.1 single-strand binding protein Not tested ¥ÕSa3 Protein 6e-32 46
SA1792 NP_375091.1 single-strand DNA-binding protein Not tested ¥ÕSa3 Protein 5e-32 46
SAV1983 NP_372507.1 single-strand DNA-binding protein Not tested ¥ÕSa3 Protein 5e-32 46