Gene Information

Name : HMPREF0351_12936 (HMPREF0351_12936)
Accession : YP_006377542.1
Strain :
Genome accession: NC_017963
Putative virulence/resistance : Unknown
Product : IS256 family transposase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 94211 - 95380 bp
Length : 1170 bp
Strand : -
Note : -

DNA sequence :
ATGACTAAATTTACTATAGAAATTATGCAAACACTACTCAATAAAGGGGATTTAGATGAATTATTTCAGGATCATTTAGA
GCGAGCGATTAATTCACTTCTACAAGCAGAGCTAACTGCTTTTTTAGATTACGAAAAATATGATCGAAATGGATTCAATT
CAGGAAATTCCCGTAACGGGAATTATTCACGTACATTTAAAACAGAATATGGCGAGTTGAATTTAACTATTCCTAGAGAT
CGGAATGGCGAATTTTCTCAACAAACACTACCAGCATATAAGCGAACCAATGATTCATTAGAAACGACCATTATCCAATT
ATTTCAAAAAGGCATTACTATGGCTGAAATCTCCAAATTAATTGAAAAAATGTATGGTCACCACTATACGCCACAAACAA
TCTCCAACATGAGTAAATTGGTGGCTGAAGATGTTTTAGCTTTTAAAGAAAGAACGTTAGAAGCCAATTATTCCGTTATA
TTTATGGATGCGACGCATATCCCTGTGAAGCGACAGACTGTTTCGAAGGAAGCAGTGTATATTACGATTGGTATTCGTTT
GGATGGAACCAAAGAAGTTCTTGGGTTTACTATTGCCCCAACTGAGTCTGCTTATATTTGGAAAGAAGTTCTTCAAGATC
TTAGAAAACGTGGGTTAGAAGAAGTTTTATTAGTAGTGACAGACGGATTAAGCTGTATTGAAGAAAGTATCCATAGTGTG
TATCCGAATGCCCAATTTCAACAATGTTGTGTGCATGTATCTAGAAATATCGCTCATAAAGTTCGTGTTCGAGATCGAAA
AGAAATTTGTGAGGATTTCAAATTGGTTTACCAAGCGAATTCAAAAGAAGAGGCATTGGATCACATCGACTTTATGACTA
GGAAATGGAAAAAGCAGTATCCAAGAGTCGTCAATTTACTCTTGAATCCTGCCCTATTAACCTTTTATAATTTCCCTCAC
GCCATCAGACGAACAATTTATTTGACGAACCTGATTGAAGGCTTTAATAAGCAGCTAAAACGATATACTCGAAGAAAAGA
ACAATTCCCTAATGAAGAATCTCTAGAGAGATTCTTCATTTCTCAATTTAATCAATATAACCAAAAATTTTTAGGTAGAA
TTCACAAGGGATTTAAAGAAATTCAGGATACATTAGAGTCGATGATTTAA

Protein sequence :
MTKFTIEIMQTLLNKGDLDELFQDHLERAINSLLQAELTAFLDYEKYDRNGFNSGNSRNGNYSRTFKTEYGELNLTIPRD
RNGEFSQQTLPAYKRTNDSLETTIIQLFQKGITMAEISKLIEKMYGHHYTPQTISNMSKLVAEDVLAFKERTLEANYSVI
FMDATHIPVKRQTVSKEAVYITIGIRLDGTKEVLGFTIAPTESAYIWKEVLQDLRKRGLEEVLLVVTDGLSCIEESIHSV
YPNAQFQQCCVHVSRNIAHKVRVRDRKEICEDFKLVYQANSKEEALDHIDFMTRKWKKQYPRVVNLLLNPALLTFYNFPH
AIRRTIYLTNLIEGFNKQLKRYTRRKEQFPNEESLERFFISQFNQYNQKFLGRIHKGFKEIQDTLESMI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
EF0595 NP_814357.1 ISEf1, transposase Not tested Not named Protein 7e-134 71
unnamed AAM21176.1 transposase Not tested Not named Protein 1e-133 71
unnamed AAM21184.1 transposase Not tested Not named Protein 1e-133 71
ef0057 AAM75262.1 EF0057 Not tested Not named Protein 1e-133 71