Gene Information

Name : HMPREF0351_10960 (HMPREF0351_10960)
Accession : YP_006375566.1
Strain : Enterococcus faecium DO
Genome accession: NC_017960
Putative virulence/resistance : Virulence
Product : ATP-binding subunit of chaperone
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 935247 - 937481 bp
Length : 2235 bp
Strand : -
Note : -

DNA sequence :
ATGCTTTGTCAAAACTGCGGCAAGAATGAGGCAACGATTCACTTGTATGCCACTGTCAATGGTCAGCGGACACAACTCGA
TTACTGTCAGAGCTGTTATCAAAAAATCAAAAATCAACAAAATGGAGGTCTGACTAATATGGCCCAAAATGATCCATTTG
GATTTGGCAGTTTGGACGATCTTTTCCGTTCCATGTCTCGCCAAATGCAACAGCAAGGAAATTATGAGCAAACACCACCA
ACACAATTTGGCGGAAACAACAACTTCAATGGTGGTCAGCCACCTCAAGGCAATACAGAAGGTTTATTGGGAGAATACGG
AATCAATATCACAGAACAAGCACGACAAGGTGATATCGATCCTGTGATCGGACGCGATGACGAAATCAAACGAGTCATTG
AAATTTTAAATCGCCGAACCAAGAACAATCCTGTCTTGATTGGAGAACCAGGTGTTGGTAAAACAGCAGTTGTTGAAGGT
TTAGCACAAAAAATCGTAGATGGTGATGTACCGCAAAAATTAATGGACAAAGAAGTCATTCGTTTAGATGTCGTATCTTT
AGTCCAAGGTACTGGTATACGAGGACAATTTGAAGAACGTATGCAAAAATTGATTGAAGAGATCCGTCAAGCAGAAAATG
TGATCCTATTCATAGATGAAGTTCACGAAATCGTCGGTGCTGGTTCTGCTGGTGATGGAAATATGGATGCTGGTAATATT
TTAAAACCAGCTTTAGCTCGAGGAGAATTGCAAATGGTTGGTGCTACTACCTTAAATGAGTACCGCATCATCGAAAAAGA
CGCTGCTTTAGAACGTCGTATGCAACCTGTACGGGTAGATGAACCAACTGTCGAAGAAACGATCAGTATTTTGAAAGGTT
TGCAAAAACGTTATGAAGACTATCATCATGTAAAATATACTGATGAGGCCATCGAAGCAGCCGCAACTTTATCCAATCGT
TACGTCCAAGATCGCTTCTTGCCGGATAAAGCCATCGATTTGCTAGATGAAACAGGTTCTAAGAAAAACTTGACGATCCA
AATCGTTGATCCTAAAACAATCGAGAAAAAACTGCAAGAAGCAGAAGAACAAAAAGTTTTAGCTTCTCGAGAAGAAGATT
TCGAAAAAGCAGCTTATTATCGCGATCAGATCAATAAACTTCAAAAAATGAAAGAACGTCAGCTCACTGAAGAGGAAACA
CCTGTGATTACCGAAAAAGATATGGAAAAAATCGTTGAACAACGGACAGGTATTCCAGTGGGTGAATTAAAAGAAAAAGA
ACAGACACAACTGAAAAACTTAGCAGATGACTTGAAAGCTCATGTCATCGGACAAGATAACGCTGTAGATCGAGTAGCGA
AAGCGATTCGCCGAAACCGTGTTGGATTAAACAAACAGAATCGTCCAATCGGCTCCTTCTTATTTGTTGGACCAACTGGT
GTAGGTAAAACAGAGCTTGCGAAACAACTTGCCTACGAACTATTCGGTTCACAAGATTCAATGATTCGTTTCGATATGTC
TGAATATATGGAAAAACATAGTGTCTCTAAATTGATTGGTTCTCCTCCAGGTTATGTCGGATACGAAGAAGCTGGTCAAT
TAACAGAAAAAGTACGGAGAAATCCTTACAGTCTTGTCTTGTTAGATGAAGTAGAAAAAGCTCATCCAGATGTTTTGCAT
ATGTTCTTGCAAATCTTAGATGATGGTCGATTGACAGATGCACAAGGAAGAACGGTCAGCTTTAAAGATACGATCATCAT
TATGACAAGTAATGCCGGAACTGGTAAAGTAGAAGCAAACGTTGGTTTTGGTGCGGCACGCGAAGGTGTTACTCGTTCTG
TATTGAACCAATTAAACAACTACTTTACACCAGAATTTCTGAACCGTTTTGACGGGATCATCGAATTCAGTGCATTATCA
AAAGAAAACTTGATGACAATCGTCACACTAATGCTAGACGATGTCAACCAAATGCTGGCAGCACAGCAACTTCACATCGA
AGTTCCTACGAATGTCAAAGAAAAATTAGTTGACTTAGGCTATGATCCATCTATGGGTGCTCGTCCTCTTCGACGCACGA
TCCAAGAACAAATCGAAGATGGTATCGCTGAATTTTATCTTGATCACCCTTCTATCCATGAGTTGAAAGCAAAACTGGAT
AAAGATGGAAAAATCATCGTTACTTCTAAACCAGAACGTTTGGCTAAAGAATCAGCCGAAGAAACGGCTGAATAA

Protein sequence :
MLCQNCGKNEATIHLYATVNGQRTQLDYCQSCYQKIKNQQNGGLTNMAQNDPFGFGSLDDLFRSMSRQMQQQGNYEQTPP
TQFGGNNNFNGGQPPQGNTEGLLGEYGINITEQARQGDIDPVIGRDDEIKRVIEILNRRTKNNPVLIGEPGVGKTAVVEG
LAQKIVDGDVPQKLMDKEVIRLDVVSLVQGTGIRGQFEERMQKLIEEIRQAENVILFIDEVHEIVGAGSAGDGNMDAGNI
LKPALARGELQMVGATTLNEYRIIEKDAALERRMQPVRVDEPTVEETISILKGLQKRYEDYHHVKYTDEAIEAAATLSNR
YVQDRFLPDKAIDLLDETGSKKNLTIQIVDPKTIEKKLQEAEEQKVLASREEDFEKAAYYRDQINKLQKMKERQLTEEET
PVITEKDMEKIVEQRTGIPVGELKEKEQTQLKNLADDLKAHVIGQDNAVDRVAKAIRRNRVGLNKQNRPIGSFLFVGPTG
VGKTELAKQLAYELFGSQDSMIRFDMSEYMEKHSVSKLIGSPPGYVGYEEAGQLTEKVRRNPYSLVLLDEVEKAHPDVLH
MFLQILDDGRLTDAQGRTVSFKDTIIIMTSNAGTGKVEANVGFGAAREGVTRSVLNQLNNYFTPEFLNRFDGIIEFSALS
KENLMTIVTLMLDDVNQMLAAQQLHIEVPTNVKEKLVDLGYDPSMGARPLRRTIQEQIEDGIAEFYLDHPSIHELKAKLD
KDGKIIVTSKPERLAKESAEETAE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
clpC YP_005163377.1 ATP-dependent Clp protease ATP-binding subunit Not tested Not named Protein 3e-153 51

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
HMPREF0351_10960 YP_006375566.1 ATP-binding subunit of chaperone VFG0080 Protein 0.0 60
HMPREF0351_10960 YP_006375566.1 ATP-binding subunit of chaperone VFG0079 Protein 2e-159 55