Gene Information

Name : HMPREF0351_10498 (HMPREF0351_10498)
Accession : YP_006375104.1
Strain : Enterococcus faecium DO
Genome accession: NC_017960
Putative virulence/resistance : Virulence
Product : ABC superfamily ATP binding cassette transporter, ABC protein
Function : -
COG functional category : -
COG ID : -
EC number : 3.6.3.-
Position : 495989 - 496735 bp
Length : 747 bp
Strand : +
Note : -

DNA sequence : 
TTGGAACGTACGGCCATTGTAATTCAAGACCTTTCAGCCGCTTATCAAGGGAAAACTGTTTTGAAAACTATCAACTTGAC
GATAAATCCACAAAAAATTACCGGTATTATCGGACCAAACGGTGCAGGAAAATCAACATTTATGAAATCTTTGCTAGAGT
TGATACCAGCTACTACTGGTAAAGTCACCTTTTCTGGACAGTCGGTAAACTCAGTCCGTAAAAAAATAGCCTACGTGGAA
CAGCGAAGTGAATTGGATCTTTCCTTTCCAATTGATGTATTAGGCGTTGTACTTTTAGGAACATATCCATCTTTACGAAT
TGGACAAAGACCTGGGAAAAAAGAAAAAGAACGTGCAAGACAAGCTTTGAAAAAAGTAGGGATGGAAGAATATGCCAAAA
GACAGATCAGCGAACTATCGGGTGGACAGCTTCAGAGAGTTTTTATTGCAAGAGCTCTAGCCCAAGGAGCAGAATGGATC
TTTTTAGATGAACCATTCGTAGGGATTGATGCGTTAAGTGAACGAAAGATCTTTGACATCTTGCAGGAATTGAAGAATTC
AGGAAAAACGATTTTGATCGTCCATCATGATCTTCATAAAGTAGAAGAATATTTCGATGAGGTTATTCTTTTAAATAAAC
AGCTGATCGCTTCCGGTCCAGTACAAGAAGTCTTTACATCGAAGAACCTTCAATTGGCCTATGGTGAGATCATCAGACAT
TTAGTAAAAGGAGGAGAGAAAAAATGA

Protein sequence : 
MERTAIVIQDLSAAYQGKTVLKTINLTINPQKITGIIGPNGAGKSTFMKSLLELIPATTGKVTFSGQSVNSVRKKIAYVE
QRSELDLSFPIDVLGVVLLGTYPSLRIGQRPGKKEKERARQALKKVGMEEYAKRQISELSGGQLQRVFIARALAQGAEWI
FLDEPFVGIDALSERKIFDILQELKNSGKTILIVHHDLHKVEEYFDEVILLNKQLIASGPVQEVFTSKNLQLAYGEIIRH
LVKGGEKK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
EF0575 NP_814340.1 cationic ABC transporter ATP-binding protein Not tested Not named Protein 4e-55 52
ef0093 AAM75296.1 EF0093 Not tested Not named Protein 3e-55 52
sitB NP_806465.1 iron ABC transporter ATP-binding protein Virulence SPI-1 Protein 4e-44 41
sitB AAD41066.1 SitB Virulence centisome 63 pathogenicity island Protein 2e-43 41
sitB NP_461783.1 ATP-binding protein Virulence SPI-1 Protein 2e-43 41
sitB NP_457256.1 Iron transport protein, ATP-binding component Virulence SPI-1 Protein 4e-44 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
HMPREF0351_10498 YP_006375104.1 ABC superfamily ATP binding cassette transporter, ABC protein BAC0400 Protein 5e-54 52
HMPREF0351_10498 YP_006375104.1 ABC superfamily ATP binding cassette transporter, ABC protein BAC0350 Protein 1e-43 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
HMPREF0351_10498 YP_006375104.1 ABC superfamily ATP binding cassette transporter, ABC protein VFG0526 Protein 1e-43 41