|
Name : lysS (HMPREF0351_12541) Accession : YP_006377147.1 Strain : Enterococcus faecium DO Genome accession: NC_017960 Putative virulence/resistance : Virulence Product : lysine--tRNA ligase Function : - COG functional category : - COG ID : - EC number : 6.1.1.6 Position : 2516945 - 2518441 bp Length : 1497 bp Strand : - Note : - DNA sequence : GTGACACAGGAACAACAACATCAAGTAGAAGATTTAAATGATCAAATGCTTGTACGTCGTCAAAAAATGGAACAATTGCG TGAAGATGGAATCGATCCATTTGGAAAACGATTTGAACGCACGCACAACTCAGAAGAATTGCATGAACTATTTGATCCAA GAACAAAAGAAGAACTAGCAGAAATGGGATTGACCGCTAGTGTAGCTGGTCGTATGATGACTCGCCGAGGAAAAGGGAAA GCTGGATTTGCGCATCTACAAGATCGTGAAGGCCAAATTCAAATTTATGTAAGAAAAGACCAAGTAGGTGATGAGGCCTA TGAAGTATTCAAACATGCAGACCTTGGAGATTTCTTTGGTGTAACTGGACAAATCATGAAAACAGACACAGGCGAAGTTT CTATCAAAGCTTCAGAAATCACGATTTTGTCAAAAGCACTTCGTCCACTGCCAGATAAATACCATGGCTTAACGAATATT GAACAACGCTACAGACAACGCTACTTGGATTTAATCAGTAATCGCGAAAGCTTTGACCGATTTATGAAACGAAGCCAAAT TATCAGCGAAATCCGTCGCTATTTAGATGGCAATGGCTATATTGAAGTAGAAACACCAGTATTGCACAATGAGGCAGGTG GAGCTGCCGCACGCCCATTTATCACGCATCATAATGCACTGGACATTGATTTATATTTGCGTATTGCGCTAGAACTTCAT TTAAAACGACTAATTGTTGGCGGAATGGAAAAAGTTTATGAAATCGGCCGCGTTTTCCGTAATGAAGGAATTGATACTAC ACATAATCCAGAATTTACGATGTTAGAAGCATACACAGCATATACTGATTTCAATGATGTAATGAATCTGACAGAAGGTA TTATCCGTAACGCAGCTGAAAAAGTACTAGGAACAGCAAAAATCACATATGATGGACAAGCTGTCGACTTAGAAAGTGAC TTTAAACGCATCCATATGGTAGATGCAATCAAAGAACAAACTGGTGTAGACTTCTGGCAAGAAATGACATTGGAAGAAGC ATTAGCTTTAGCCGAAAAACACAATGTAGAAGTAACCGAAGCTATGGGTGTCGGACATGTTATCAATGAATTCTTTGAAA CATTTGTTGAAGAAACATTGACACAACCGACGTTTGTATACGGACATCCAGTCGAAGTTTCGCCTTTAGCGAAGAAAAAT CCAGAAGATCCTCGATTCACAGATCGATTCGAACTATTCATAGTGGGGCGCGAATTTGCTAATGCCTTTACAGAACTGAA CGATCCAATTGATCAAAGAGAAAGATTCGAAGCGCAAGAAAAAGAACGTGAACTAGGAAATGACGAAGCTCACGGTGTAG ACGAAGACTTCTTGGAAGCCTTAGAATACGGTATGCCGCCAACTGGTGGTCTAGGCATCGGGATCGACAGATTAGTAATG TTGCTAACTGATGCACAATCAATTCGGGATGTTTTGCTATTCCCAACAATGAGATAA Protein sequence : MTQEQQHQVEDLNDQMLVRRQKMEQLREDGIDPFGKRFERTHNSEELHELFDPRTKEELAEMGLTASVAGRMMTRRGKGK AGFAHLQDREGQIQIYVRKDQVGDEAYEVFKHADLGDFFGVTGQIMKTDTGEVSIKASEITILSKALRPLPDKYHGLTNI EQRYRQRYLDLISNRESFDRFMKRSQIISEIRRYLDGNGYIEVETPVLHNEAGGAAARPFITHHNALDIDLYLRIALELH LKRLIVGGMEKVYEIGRVFRNEGIDTTHNPEFTMLEAYTAYTDFNDVMNLTEGIIRNAAEKVLGTAKITYDGQAVDLESD FKRIHMVDAIKEQTGVDFWQEMTLEEALALAEKHNVEVTEAMGVGHVINEFFETFVEETLTQPTFVYGHPVEVSPLAKKN PEDPRFTDRFELFIVGREFANAFTELNDPIDQRERFEAQEKERELGNDEAHGVDEDFLEALEYGMPPTGGLGIGIDRLVM LLTDAQSIRDVLLFPTMR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | CAD66193.1 | putative lysil-tRNA synthetase LysU | Not tested | PAI III 536 | Protein | 3e-114 | 49 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| lysS | YP_006377147.1 | lysine--tRNA ligase | VFG1668 | Protein | 2e-114 | 49 |
