Gene Information

Name : vicR (HMPREF0351_12362)
Accession : YP_006376968.1
Strain : Enterococcus faecium DO
Genome accession: NC_017960
Putative virulence/resistance : Virulence
Product : response regulator VicR
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2308544 - 2309278 bp
Length : 735 bp
Strand : -
Note : -

DNA sequence : 
ATGACAATAATATATAAGAGGTGGCTCTTTATGAAAAAAGTTTTAGTTGTCGATGATGAGAAGCCGATTTCGGATATCGT
CAAATTCAATTTAGCCAAAGAAGGCTATGATGTTTATACTGCATATGATGGGGAAGAAGCCTTGGAAAAAGTTGCTGAGG
TAGAACCTGATTTGATTTTACTTGATTTGATGCTACCTAAAATGGACGGCTTAGAAGTTGCTCGTGAGGTACGCAAAACT
TATGATATGCCGATCATTATGGTAACAGCCAAAGATTCTGAAATTGATAAAGTCCTAGGCTTAGAGTTAGGCGCCGATGA
TTACGTGACCAAGCCATTTTCCAACCGAGAATTAGTTGCACGTGTCAAAGCAAATCTTCGTCGCGGTGCCACGGCTGCGA
AGGAACCAGAAGAGGCAGCACCTGCGGAATTGACGATTGGTGATTTGACGATCCATCCAGAAGCTTACATGGTGACGAAA
CGAGGAGAAACAATCGAGTTAACACATCGTGAATTCGAACTACTCTTTTACTTGGCGAAGCACCTTGGACAAGTGATGAC
AAGAGAACATTTATTACAAACGGTTTGGGGTTATGATTATTTTGGAGATGTACGAACAGTGGATGTAACTGTACGTCGTT
TGCGTGAAAAGATCGAAGATAATCCAAGCCATCCAAATTATTTAGTGACACGTCGTGGTGTCGGTTACTATTTGCGTAAC
CCAGAACAGGAGTAA

Protein sequence : 
MTIIYKRWLFMKKVLVVDDEKPISDIVKFNLAKEGYDVYTAYDGEEALEKVAEVEPDLILLDLMLPKMDGLEVAREVRKT
YDMPIIMVTAKDSEIDKVLGLELGADDYVTKPFSNRELVARVKANLRRGATAAKEPEEAAPAELTIGDLTIHPEAYMVTK
RGETIELTHREFELLFYLAKHLGQVMTREHLLQTVWGYDYFGDVRTVDVTVRRLREKIEDNPSHPNYLVTRRGVGYYLRN
PEQE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
c3565 NP_755440.1 response regulator Not tested PAI I CFT073 Protein 8e-31 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
vicR YP_006376968.1 response regulator VicR NC_012469.1.7685629. Protein 2e-66 69
vicR YP_006376968.1 response regulator VicR NC_009641.5332272.p0 Protein 1e-50 54
vicR YP_006376968.1 response regulator VicR NC_013450.8614421.p0 Protein 1e-50 54
vicR YP_006376968.1 response regulator VicR NC_007793.3914279.p0 Protein 1e-50 54
vicR YP_006376968.1 response regulator VicR NC_002952.2859905.p0 Protein 2e-50 54
vicR YP_006376968.1 response regulator VicR NC_007622.3794472.p0 Protein 9e-51 54
vicR YP_006376968.1 response regulator VicR NC_002745.1124361.p0 Protein 1e-50 54
vicR YP_006376968.1 response regulator VicR NC_009782.5559369.p0 Protein 1e-50 54
vicR YP_006376968.1 response regulator VicR NC_002951.3237708.p0 Protein 1e-50 54
vicR YP_006376968.1 response regulator VicR NC_003923.1003749.p0 Protein 1e-50 54
vicR YP_006376968.1 response regulator VicR NC_002758.1121668.p0 Protein 1e-50 54
vicR YP_006376968.1 response regulator VicR HE999704.1.gene2815. Protein 5e-45 52
vicR YP_006376968.1 response regulator VicR NC_012469.1.7686381. Protein 6e-39 51
vicR YP_006376968.1 response regulator VicR AE016830.1.gene1681. Protein 5e-44 49
vicR YP_006376968.1 response regulator VicR CP000647.1.gene4257. Protein 1e-32 47
vicR YP_006376968.1 response regulator VicR BAC0533 Protein 1e-32 47
vicR YP_006376968.1 response regulator VicR AF155139.2.orf0.gene Protein 1e-36 46
vicR YP_006376968.1 response regulator VicR AE000516.2.gene3505. Protein 4e-35 46
vicR YP_006376968.1 response regulator VicR CP004022.1.gene3215. Protein 5e-36 46
vicR YP_006376968.1 response regulator VicR CP001138.1.gene4273. Protein 2e-32 46
vicR YP_006376968.1 response regulator VicR FJ349556.1.orf0.gene Protein 3e-39 45
vicR YP_006376968.1 response regulator VicR CP000034.1.gene3834. Protein 4e-32 45
vicR YP_006376968.1 response regulator VicR NC_002695.1.915041.p Protein 4e-32 45
vicR YP_006376968.1 response regulator VicR HE999704.1.gene1528. Protein 3e-30 43
vicR YP_006376968.1 response regulator VicR AM180355.1.gene1830. Protein 9e-37 43
vicR YP_006376968.1 response regulator VicR NC_002952.2859858.p0 Protein 6e-35 43
vicR YP_006376968.1 response regulator VicR NC_007622.3794948.p0 Protein 6e-35 43
vicR YP_006376968.1 response regulator VicR NC_003923.1003417.p0 Protein 6e-35 43
vicR YP_006376968.1 response regulator VicR NC_013450.8614146.p0 Protein 6e-35 43
vicR YP_006376968.1 response regulator VicR NC_002951.3238224.p0 Protein 6e-35 43
vicR YP_006376968.1 response regulator VicR NC_007793.3914065.p0 Protein 6e-35 43
vicR YP_006376968.1 response regulator VicR NC_002758.1121390.p0 Protein 6e-35 43
vicR YP_006376968.1 response regulator VicR NC_010079.5776364.p0 Protein 6e-35 43
vicR YP_006376968.1 response regulator VicR NC_002695.1.916589.p Protein 4e-28 43
vicR YP_006376968.1 response regulator VicR BAC0039 Protein 4e-28 43
vicR YP_006376968.1 response regulator VicR CP000034.1.gene2186. Protein 4e-28 43
vicR YP_006376968.1 response regulator VicR AF130997.1.orf0.gene Protein 2e-34 42
vicR YP_006376968.1 response regulator VicR DQ212986.1.gene4.p01 Protein 1e-35 42
vicR YP_006376968.1 response regulator VicR BAC0596 Protein 6e-27 42
vicR YP_006376968.1 response regulator VicR CP001918.1.gene3444. Protein 3e-27 42
vicR YP_006376968.1 response regulator VicR CP001138.1.gene2239. Protein 6e-27 42
vicR YP_006376968.1 response regulator VicR NC_005054.2598277.p0 Protein 2e-33 41
vicR YP_006376968.1 response regulator VicR NC_014475.1.orf0.gen Protein 2e-33 41
vicR YP_006376968.1 response regulator VicR AF162694.1.orf4.gene Protein 7e-31 41
vicR YP_006376968.1 response regulator VicR AE015929.1.gene1106. Protein 1e-29 41
vicR YP_006376968.1 response regulator VicR CP000647.1.gene2531. Protein 5e-27 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
vicR YP_006376968.1 response regulator VicR VFG1386 Protein 9e-32 44
vicR YP_006376968.1 response regulator VicR VFG1389 Protein 7e-28 43
vicR YP_006376968.1 response regulator VicR VFG1390 Protein 3e-31 41
vicR YP_006376968.1 response regulator VicR VFG1702 Protein 3e-31 41