Gene Information

Name : smpB (HMPREF0351_12054)
Accession : YP_006376660.1
Strain : Enterococcus faecium DO
Genome accession: NC_017960
Putative virulence/resistance : Unknown
Product : SsrA-binding protein SmpB
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2002255 - 2002719 bp
Length : 465 bp
Strand : -
Note : -

DNA sequence :
ATGCCAAAAGGCGAGGGAAAATTAATTGCACAAAACAAGAAAGCTCGCCATGATTATTCGATCATCGACACGATGGAAGC
AGGGATGGTCTTGCAAGGAACCGAGATCAAGTCGATACGAAACAGCCGGATCAATCTAAAAGATGGATTTATTCGCGTCC
GCAACGGAGAAGCTTTCTTGCATAATGTTCATATCAGTCCTTATGAACAAGGAAATATTTTTAATCATGATCCGTTGCGC
ACGAGAAAGTTATTATTACACAAAAAACAAATCATCCGGCTTGAAAATGAATTGAAAAATACTGGAATCACTGTTGTTCC
TTTAAAAGTCTATATTCGTAACGGCTATGCCAAGGTATTGATTGGTCTGGCGAAAGGGAAAAAATCTTATGATAAACGGG
AAGATTTGAAACGAAAAGATATCGATCGACAAATTGATCGAACATTAAAAAATTTCTCTAGATAA

Protein sequence :
MPKGEGKLIAQNKKARHDYSIIDTMEAGMVLQGTEIKSIRNSRINLKDGFIRVRNGEAFLHNVHISPYEQGNIFNHDPLR
TRKLLLHKKQIIRLENELKNTGITVVPLKVYIRNGYAKVLIGLAKGKKSYDKREDLKRKDIDRQIDRTLKNFSR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AET14351.1 SsrA-binding protein Not tested SaPI68111 Protein 7e-43 59
smpB YP_001800894.1 SsrA-binding protein Not tested Not named Protein 1e-30 45
smpB NP_230495.1 SsrA-binding protein Not tested VPI-1 Protein 8e-25 43