Gene Information

Name : HMPREF0351_11748 (HMPREF0351_11748)
Accession : YP_006376354.1
Strain : Enterococcus faecium DO
Genome accession: NC_017960
Putative virulence/resistance : Virulence
Product : response regulator
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1724100 - 1724816 bp
Length : 717 bp
Strand : -
Note : -

DNA sequence : 
ATGAATATTTTAATGATTGAAGATAATCAATCTGTTTCTGAAATGATGCAGATGTTTTTCTTAAATGAAGGTTGGGAAGC
AACTTTCAAGTATGATGGAAAAGAAGGGCTCGATGCCTTTTTAGAAAACCCACAACATTGGGATATGATTACACTAGACC
TGAATTTGCCCACACTGGACGGTATGCTAGTAGGAAGAGAGATCCGCAAAGTTTCAAGTACTGTGCCGATTATCATGCTG
ACAGCTAGAGATTCTGAAAGCGATCAGGTGATCGGCTTAGAGATGGGGGCAGATGATTATGTCACAAAACCTTTCAGTCC
TCTGACGCTTATTGCTCGAATGAAAGCTTTGCATCGCCGTAGTGAGTTGGCAGAAGCAAGAGAAGAAGCAGTAGTTTCAG
ATGATCATTTTGATATCGAGACTAGTCATTTCAAGATGAATACGAAAACACGAGAAGCGTATCTGGACAACCGGCCAATT
GAAGGACTGACGCCTAAAGAGTTCGATCTATTGTTTACTTTAGCAAAAAAACCACGTCAAGTATTCTCTCGGGAGCAGTT
GCTTGAATTAGTCTGGGATTATCAGTACTTTGGTGATGAACGGACAGTGGACGCCCATATCAAGAAATTACGACAAAAAA
TCGAAAAGGTCGGACCACAAGTCATCCAAACTGTTTGGGGAGTCGGCTACAAATTCGATGATTCTGGTGTTGCCTAA

Protein sequence : 
MNILMIEDNQSVSEMMQMFFLNEGWEATFKYDGKEGLDAFLENPQHWDMITLDLNLPTLDGMLVGREIRKVSSTVPIIML
TARDSESDQVIGLEMGADDYVTKPFSPLTLIARMKALHRRSELAEAREEAVVSDDHFDIETSHFKMNTKTREAYLDNRPI
EGLTPKEFDLLFTLAKKPRQVFSREQLLELVWDYQYFGDERTVDAHIKKLRQKIEKVGPQVIQTVWGVGYKFDDSGVA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42044.1 hypothetical protein Not tested PAI II 536 Protein 3e-34 42
c3565 NP_755440.1 response regulator Not tested PAI I CFT073 Protein 1e-33 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
HMPREF0351_11748 YP_006376354.1 response regulator NC_012469.1.7685629. Protein 4e-38 45
HMPREF0351_11748 YP_006376354.1 response regulator HE999704.1.gene2815. Protein 4e-37 42
HMPREF0351_11748 YP_006376354.1 response regulator AE000516.2.gene3505. Protein 6e-32 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
HMPREF0351_11748 YP_006376354.1 response regulator VFG1563 Protein 2e-34 42
HMPREF0351_11748 YP_006376354.1 response regulator VFG1702 Protein 4e-34 41