Gene Information

Name : HMPREF0351_11397 (HMPREF0351_11397)
Accession : YP_006376003.1
Strain : Enterococcus faecium DO
Genome accession: NC_017960
Putative virulence/resistance : Resistance
Product : ABC superfamily ATP binding cassette transporter, ABC protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1385385 - 1386071 bp
Length : 687 bp
Strand : -
Note : -

DNA sequence : 
ATGAAAAAAATATTAACGATGAAAAAAGTTACCAAAACATTTGGTTCTGGTCATACAAAGGTCTCAGCTTTGAAAGCAAT
TGATTTTTATGTAAAGGAAGGAGAATTCGTCAGCATCATTGGTCCTTCTGGTTCAGGTAAAAGTACTTTCCTTACCATTT
CAGGAGGATTGCAAACACCGACTTCCGGAGAAATAGTGATCAACGGTCACTCACTAACTGAGCTTCCAGAAAAAAAACGA
GCAGATTTACGCTTTAAAGAAATAGGATTTATTCTCCAAAGCTCTAATTTGATTCCTTTTTTAACGGTAAAGGAACAATT
TGAACTAGTTGACCAAGTTACTTCAAAAAAAGAAGATTCAACAAAAATCGATTCCTTGCTGCAATCTTTAGATATCCAGT
CACTTAAAAATAGTTATCCTAAAGACCTTTCTGGTGGAGAAAGACAGAGAGTGGCAATTGCTCGCGCTTTATATAATGAG
CCAAGCTTGATCTTAGCAGACGAACCAACAGCTAGTTTGGATACAGATCATGCATATGAAGTCGTCAAATTACTAGTTAA
AGAAGCTCATGAGAAACAAAAAGCGACTATTATGGTTACTCATGATGTCCGTATGATTCAATGGAGTGATCGCGTTTATC
GAATGGAAGATGGGTACTTGACAGAAGAAGAGAAAAAGAAGGAATGA

Protein sequence : 
MKKILTMKKVTKTFGSGHTKVSALKAIDFYVKEGEFVSIIGPSGSGKSTFLTISGGLQTPTSGEIVINGHSLTELPEKKR
ADLRFKEIGFILQSSNLIPFLTVKEQFELVDQVTSKKEDSTKIDSLLQSLDIQSLKNSYPKDLSGGERQRVAIARALYNE
PSLILADEPTASLDTDHAYEVVKLLVKEAHEKQKATIMVTHDVRMIQWSDRVYRMEDGYLTEEEKKKE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAP55232.1 unknown Not tested SaPIbov2 Protein 6e-49 50
SARLGA251_00480 YP_005754062.1 ABC-type transport system ATPase Not tested Type-XI SCCmec Protein 1e-42 48
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 7e-33 42
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-33 41
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 4e-33 41
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-33 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
HMPREF0351_11397 YP_006376003.1 ABC superfamily ATP binding cassette transporter, ABC protein CP001581.1.gene798.p Protein 3e-36 42