Gene Information

Name : xerD (HMPREF0351_11092)
Accession : YP_006375698.1
Strain : Enterococcus faecium DO
Genome accession: NC_017960
Putative virulence/resistance : Unknown
Product : site-specific recombinase XerD
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1082328 - 1083230 bp
Length : 903 bp
Strand : +
Note : -

DNA sequence :
ATGAGGGGGATTATTATGAAAGAGCAAATCAACGATTATCTCCACTACTTGAATATTGAACGGGGATTGTCCGCCAATAC
ACGACAAAGCTATGAACGTGATTTGGAACAGTACTTGCATTTTCTACAGGAGCAGAAAATTGCTTCATGGCAGGATGTCG
ATCGCTTTTTAGTCATCCGTTTTCTGGAGAAGTTGCATGAAGAAAAAAAAGCGACAGCAACTGTTACTCGGATGATCTCA
AGTCTCAGAAGATTCCATCAGTTTTTACGGCAAGAGCGTATCACTGATCATGATCCGATGCAACATATCGATACGCCGAA
GAAAGCACAGAAATTACCAAGTACATTGACTCTGACAGAAGTAGAAAAGCTGATTGAAGCACCTGATACGACAAAAACGT
TAGGGATAAGAGATCGTGCAATCTTGGAAGTCATGTATGCTACTGGGATGCGCGTCAGTGAATTGATTGGATTGAAATTG
GGAGATCTTCATCTTTCTCTTGGACTGGTACAGACAGTTGGAAAAGGAGATAAAGAGCGGATCATTCCTTTAGGTGATTA
TGCGATCCAATGGCTGGAACGCTACTTAGACGAAGCACGTCCATTACTTGTAAAGGACGCATCTGAAATGCATGTATTTG
TCAATAATCATGGGAAAGGTCTTTCTCGGCAAGGAATCTGGAAAAATCTGAAGCAGTTAGTACGAGAGGCTGGGATTTAC
AAAGAAGTAACACCACATACGCTGCGGCATAGCTTTGCCACACATCTGCTAGAAAATGGAGCTGATTTGCGGACAGTACA
GGAATTGTTAGGTCACGCGGATATCTCTACGACTCAGATTTATACACATATCACGAAGAAAAGAATGACGGATGTTTATA
AGCAGCATTTTCCAAGGGCTTAG

Protein sequence :
MRGIIMKEQINDYLHYLNIERGLSANTRQSYERDLEQYLHFLQEQKIASWQDVDRFLVIRFLEKLHEEKKATATVTRMIS
SLRRFHQFLRQERITDHDPMQHIDTPKKAQKLPSTLTLTEVEKLIEAPDTTKTLGIRDRAILEVMYATGMRVSELIGLKL
GDLHLSLGLVQTVGKGDKERIIPLGDYAIQWLERYLDEARPLLVKDASEMHVFVNNHGKGLSRQGIWKNLKQLVREAGIY
KEVTPHTLRHSFATHLLENGADLRTVQELLGHADISTTQIYTHITKKRMTDVYKQHFPRA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00307 YP_008207772.1 Site-specific recombinase XerD Not tested AbaR25 Protein 1e-55 43
BJAB0868_00311 YP_008211637.1 Site-specific recombinase XerD Not tested AbaR26 Protein 1e-55 43